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protocols::make_rot_lib::MakeRotLibMover Member List

This is the complete list of members for protocols::make_rot_lib::MakeRotLibMover, including all inherited members.

angle_diff(core::Real a1, core::Real a2)protocols::make_rot_lib::MakeRotLibMover
apply(core::pose::Pose &pose) overrideprotocols::make_rot_lib::MakeRotLibMovervirtual
bbs_appropriate_for_definitions(utility::vector1< core::Real > bbs)protocols::make_rot_lib::MakeRotLibMover
calc_all_dist()protocols::make_rot_lib::MakeRotLibMover
calc_centroids()protocols::make_rot_lib::MakeRotLibMover
calc_dist(RotData &rd1, RotData &rd2)protocols::make_rot_lib::MakeRotLibMover
calc_final_rotamer_probs()protocols::make_rot_lib::MakeRotLibMover
calc_final_rotamers()protocols::make_rot_lib::MakeRotLibMover
calc_medoids()protocols::make_rot_lib::MakeRotLibMover
calc_rotamer_clusters()protocols::make_rot_lib::MakeRotLibMover
calc_running_avg(core::Real angle_new, core::Real &angle_old, core::Size &count)protocols::make_rot_lib::MakeRotLibMover
calc_standard_deviations(core::pose::Pose &pose, utility::vector1< core::Real > bbs, utility::vector1< core::Size > bb_ids, MakeRotLibPolymerType polymer_type)protocols::make_rot_lib::MakeRotLibMover
centroids_protocols::make_rot_lib::MakeRotLibMoverprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() constprotocols::moves::Movervirtual
create()protocols::moves::Movervirtual
current_job_protocols::moves::Moverprivate
current_tag_protocols::moves::Moverprivate
final_rotamers_protocols::make_rot_lib::MakeRotLibMoverprivate
fresh_instance() constprotocols::moves::Movervirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() constprotocols::moves::Mover
get_current_tag() constprotocols::moves::Moverinline
get_input_pose() constprotocols::moves::Mover
get_last_move_status() constprotocols::moves::Mover
get_name() const overrideprotocols::make_rot_lib::MakeRotLibMoverinlinevirtual
get_native_pose() constprotocols::moves::Mover
get_self_ptr() constprotocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() constprotocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() constprotocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() constprotocols::moves::Moverinlinevirtual
info_protocols::moves::Moverprivate
init_centroids(CentroidRotNumVecVec const &centroid_data, core::Size num_chi, bool semirotameric)protocols::make_rot_lib::MakeRotLibMover
init_rotamers(TorsionRangeVec const &chi_ranges, core::Size num_clusters, core::Real omg, utility::vector1< core::Real > bbs, utility::vector1< core::Size > bbids, core::Real eps, bool semirotameric)protocols::make_rot_lib::MakeRotLibMover
input_pose_protocols::moves::Moverprivate
KbT_protocols::make_rot_lib::MakeRotLibMoverprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
last_status_protocols::moves::Moverprivate
make_three_fold_symmetry_90_210_330(RotDataVec &rdv, core::Size chi_num)protocols::make_rot_lib::MakeRotLibMover
make_two_fold_symmetry_0_180(RotDataVec &rdv, core::Size chi_num)protocols::make_rot_lib::MakeRotLibMover
make_two_fold_symmetry_135_315(RotDataVec &rdv, core::Size chi_num)protocols::make_rot_lib::MakeRotLibMover
MakeRotLibMover(bool const write_log_file=true)protocols::make_rot_lib::MakeRotLibMover
minimize_all_rotamers(core::pose::Pose &pose, utility::vector1< core::Real > bbs, utility::vector1< core::Size > bb_ids, MakeRotLibPolymerType polymer_type)protocols::make_rot_lib::MakeRotLibMover
minimize_rotamer(RotData &rd, core::pose::Pose &pose, utility::vector1< core::Real > bbs, utility::vector1< core::Size > bb_ids, MakeRotLibPolymerType polymer_type)protocols::make_rot_lib::MakeRotLibMover
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
native_pose_protocols::moves::Moverprivate
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)protocols::moves::Movervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
print_avg_cluster_centroid_dist(std::ostream &os)protocols::make_rot_lib::MakeRotLibMover
print_definitions(std::ostream &os)protocols::make_rot_lib::MakeRotLibMover
print_dunbrack02_rotlib(core::Real omg, utility::vector1< core::Real > bbs, utility::vector1< core::Size > bbids, core::Real eps, MakeRotLibPolymerType polymer_type, std::ostream &os)protocols::make_rot_lib::MakeRotLibMover
print_dunbrack10_rotlib(core::Real omg, utility::vector1< core::Real > bbs, utility::vector1< core::Size > bbids, core::Real eps, MakeRotLibPolymerType polymer_type, std::ostream &os)protocols::make_rot_lib::MakeRotLibMover
print_rot_data(RotData &rd, utility::vector1< core::Size > bb_ids, std::ostream &os)protocols::make_rot_lib::MakeRotLibMover
print_rot_data_vec(RotDataVec &rdv, utility::vector1< core::Size > bb_ids, std::ostream &os)protocols::make_rot_lib::MakeRotLibMover
provide_citation_info(basic::citation_manager::CitationCollectionList &) constprotocols::moves::Movervirtual
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() constprotocols::moves::Movervirtual
reinitialize_for_new_input() constprotocols::moves::Movervirtual
reset_status()protocols::moves::Mover
rotamers_protocols::make_rot_lib::MakeRotLibMoverprivate
scrfxn_protocols::make_rot_lib::MakeRotLibMoverprivate
seed_centroids(bool semirotameric)protocols::make_rot_lib::MakeRotLibMover
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_type(std::string const &setting)protocols::moves::Moverinline
show(std::ostream &output=std::cout) constprotocols::moves::Movervirtual
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type(const std::string &type_in)protocols::moves::Moverinline
type() constprotocols::moves::Moverinline
type_protocols::moves::Moverprivate
write_log_file_protocols::make_rot_lib::MakeRotLibMoverprivate
~MakeRotLibMover() override=defaultprotocols::make_rot_lib::MakeRotLibMover