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protocols::kinematic_closure::perturbers::IdealizeNonPhiPsi Class Reference

Set all the non-phi/psi DOFs to ideal values. More...

#include <IdealizeNonPhiPsi.hh>

Inheritance diagram for protocols::kinematic_closure::perturbers::IdealizeNonPhiPsi:
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Public Member Functions

std::string get_name () const override
 Return the name of this perturber. More...
 
void perturb_subset (Pose const &pose, IndexList const &residues, ClosureProblemOP problem) override
 
void perturb_subset_with_balance (Pose const &pose, IndexList const &residues, ClosureProblemOP problem) override
 Perturb the given residues such that detailed balance is obeyed. More...
 
- Public Member Functions inherited from protocols::kinematic_closure::perturbers::Perturber
void perturb (Pose const &pose, ClosureProblemOP problem)
 Perturb all of the non-pivot residues. More...
 
void perturb_with_balance (Pose const &pose, ClosureProblemOP problem)
 Perturb all of the non-pivot residues such that detailed balance is obeyed. More...
 

Detailed Description

Set all the non-phi/psi DOFs to ideal values.

The phi and psi torsion angles don't really have ideal values; that's what the Ramachandran distribution is. Use the RamaPerturber to set sample those DOFs and this perturber to idealize all the others. Note that this perturber uses hard-coded ideal values that were inherited from the legacy kinematic closure implementation. I don't know how they were measured.

Member Function Documentation

std::string protocols::kinematic_closure::perturbers::IdealizeNonPhiPsi::get_name ( ) const
inlineoverridevirtual

Return the name of this perturber.

Implements protocols::kinematic_closure::perturbers::Perturber.

void protocols::kinematic_closure::perturbers::IdealizeNonPhiPsi::perturb_subset ( Pose const &  pose,
IndexList const &  residues,
ClosureProblemOP  problem 
)
overridevirtual
void protocols::kinematic_closure::perturbers::IdealizeNonPhiPsi::perturb_subset_with_balance ( Pose const &  pose,
IndexList const &  residues,
ClosureProblemOP  problem 
)
overridevirtual

Perturb the given residues such that detailed balance is obeyed.

If not reimplemented, this method will kill rosetta and complain that no balanced implementation of this algorithm exists.

Reimplemented from protocols::kinematic_closure::perturbers::Perturber.

References perturb_subset().


The documentation for this class was generated from the following files: