Rosetta  2021.16
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core::energy_methods::IdealParametersDatabase Member List

This is the complete list of members for core::energy_methods::IdealParametersDatabase, including all inherited members.

add_impropers_from_stream(std::istream &instream)core::energy_methods::IdealParametersDatabaseprivate
bbdep_bond_devs() const core::energy_methods::IdealParametersDatabaseinline
bbdep_bond_devs_core::energy_methods::IdealParametersDatabaseprivate
bbdep_bond_params() const core::energy_methods::IdealParametersDatabaseinline
bbdep_bond_params_core::energy_methods::IdealParametersDatabaseprivate
bondangles_bbdep_def_core::energy_methods::IdealParametersDatabaseprivate
bondangles_bbdep_gly_core::energy_methods::IdealParametersDatabaseprivate
bondangles_bbdep_prepro_core::energy_methods::IdealParametersDatabaseprivate
bondangles_bbdep_pro_core::energy_methods::IdealParametersDatabaseprivate
bondangles_bbdep_valile_core::energy_methods::IdealParametersDatabaseprivate
bondangles_indep_core::energy_methods::IdealParametersDatabaseprivate
bondlengths_bbdep_def_core::energy_methods::IdealParametersDatabaseprivate
bondlengths_bbdep_gly_core::energy_methods::IdealParametersDatabaseprivate
bondlengths_bbdep_prepro_core::energy_methods::IdealParametersDatabaseprivate
bondlengths_bbdep_pro_core::energy_methods::IdealParametersDatabaseprivate
bondlengths_bbdep_valile_core::energy_methods::IdealParametersDatabaseprivate
bondlengths_indep_core::energy_methods::IdealParametersDatabaseprivate
create_parameters_for_restype(core::chemical::ResidueType const &restype, bool prepro)core::energy_methods::IdealParametersDatabaseprivate
generate_impropers_map_res(core::chemical::ResidueType const &restype)core::energy_methods::IdealParametersDatabase
IdealParametersDatabase(Real k_len, Real k_ang, Real k_tors, Real k_tors_prot, Real k_tors_improper)core::energy_methods::IdealParametersDatabase
IdealParametersDatabase(IdealParametersDatabase const &)=deletecore::energy_methods::IdealParametersDatabase
impropers_indep_core::energy_methods::IdealParametersDatabaseprivate
init(Real k_len, Real k_ang, Real k_tors, Real k_tors_prot, Real k_tors_improper)core::energy_methods::IdealParametersDatabaseprivate
k_angle() const core::energy_methods::IdealParametersDatabaseinline
k_angle_core::energy_methods::IdealParametersDatabaseprivate
k_length() const core::energy_methods::IdealParametersDatabaseinline
k_length_core::energy_methods::IdealParametersDatabaseprivate
k_torsion() const core::energy_methods::IdealParametersDatabaseinline
k_torsion_core::energy_methods::IdealParametersDatabaseprivate
k_torsion_improper() const core::energy_methods::IdealParametersDatabaseinline
k_torsion_improper_core::energy_methods::IdealParametersDatabaseprivate
k_torsion_proton() const core::energy_methods::IdealParametersDatabaseinline
k_torsion_proton_core::energy_methods::IdealParametersDatabaseprivate
lookup_angle(core::chemical::ResidueType const &rsd_type, bool pre_proline, std::string const &atm1_name, std::string const &atm2_name, std::string const &atm3_name, int atm1idx, int atm2idx, int atm3idx)core::energy_methods::IdealParametersDatabase
lookup_angle_legacy(core::pose::Pose const &pose, core::conformation::Residue const &res, int atm1, int atm2, int atm3, Real &Ktheta, Real &d0) const core::energy_methods::IdealParametersDatabase
lookup_bondangle_buildideal(core::chemical::ResidueType const &restype, int atm1, int atm2, int atm3, Real &Ktheta, Real &theta0) const core::energy_methods::IdealParametersDatabaseprivate
lookup_bondlength_buildideal(core::chemical::ResidueType const &restype, int atm1, int atm2, Real &Kd, Real &d0) const core::energy_methods::IdealParametersDatabaseprivate
lookup_improper(core::chemical::ResidueType const &rsd_type, std::string const &atm1_name, std::string const &atm2_name, std::string const &atm3_name, std::string const &atm4_name)core::energy_methods::IdealParametersDatabase
lookup_length(core::chemical::ResidueType const &rsd_type, bool pre_proline, std::string const &atm1_name, std::string const &atm2_name, int atm1idx, int atm2idx)core::energy_methods::IdealParametersDatabase
lookup_length_legacy(core::pose::Pose const &pose, core::conformation::Residue const &res, int atm1, int atm2, Real &Kd, Real &d0) const core::energy_methods::IdealParametersDatabase
lookup_torsion_legacy(core::chemical::ResidueType const &restype, int atm1, int atm2, int atm3, int atm4, Real &Kphi, Real &phi0, Real &phi_step) const core::energy_methods::IdealParametersDatabase
nonprepro_restype_data_core::energy_methods::IdealParametersDatabaseprivate
operator=(IdealParametersDatabase const &)=deletecore::energy_methods::IdealParametersDatabase
parameters_for_restype(core::chemical::ResidueType const &restype, bool prepro)core::energy_methods::IdealParametersDatabase
prepro_restype_data_core::energy_methods::IdealParametersDatabaseprivate
read_angle_database(std::string const &infile, bool const symmetrize_gly)core::energy_methods::IdealParametersDatabaseprivate
read_bbdep_table(std::string const &filename, boost::unordered_map< atm_name_single, core::scoring::methods::CartBondedParametersOP > &bondlengths, boost::unordered_map< atm_name_pair, core::scoring::methods::CartBondedParametersOP > &bondangles, std::string const &res, bool const symmetrize_table)core::energy_methods::IdealParametersDatabaseprivate
read_improper_database(std::string const &infile, bool const symmetrize_gly)core::energy_methods::IdealParametersDatabaseprivate
read_length_database(std::string const &infile, bool const symmetrize_gly)core::energy_methods::IdealParametersDatabaseprivate
read_torsion_database(std::string const &infile, bool const symmetrize_gly)core::energy_methods::IdealParametersDatabaseprivate
restype_destruction_observer(core::chemical::RestypeDestructionEvent const &event)core::energy_methods::IdealParametersDatabase
symmetrize_tables(ObjexxFCL::FArray2D< core::Real > &table) const core::energy_methods::IdealParametersDatabaseprivate
torsions_indep_core::energy_methods::IdealParametersDatabaseprivate
TorsionsIndepSubmap typedefcore::energy_methods::IdealParametersDatabase
~IdealParametersDatabase() overridecore::energy_methods::IdealParametersDatabase