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protocols::jd2::VectorPoseJobDistributor Member List

This is the complete list of members for protocols::jd2::VectorPoseJobDistributor, including all inherited members.

add_batch(std::string const &, core::Size id=0)protocols::jd2::JobDistributorvirtual
apply_parsed_protocol_mpi(core::pose::PoseOP &pose, protocols::rosetta_scripts::ParsedProtocolOP &protocol)protocols::jd2::VectorPoseJobDistributor
apply_parsed_protocol_serial(utility::vector1< core::pose::PoseOP > &working_poses, utility::vector1< protocols::rosetta_scripts::ParsedProtocolOP > &protocols, utility::vector1< core::Size > &pose_order)protocols::jd2::VectorPoseJobDistributor
batch(core::Size batch_id)protocols::jd2::JobDistributorinlineprotected
batch_underflow()protocols::jd2::JobDistributorinlineprotectedvirtual
begin_critical_section()protocols::jd2::JobDistributorprotected
check_for_parser_in_go_main()protocols::jd2::JobDistributorprotected
clear_current_job_output()protocols::jd2::JobDistributorprotected
current_batch_id() const protocols::jd2::JobDistributorinline
current_job() const overrideprotocols::jd2::VectorPoseJobDistributorvirtual
current_job_finished()protocols::jd2::JobDistributorprotectedvirtual
current_job_id() const protocols::jd2::JobDistributor
current_nstruct_protocols::jd2::VectorPoseJobDistributorprivate
current_output_name() const protocols::jd2::JobDistributorvirtual
current_pose_protocols::jd2::VectorPoseJobDistributorprivate
end_critical_section()protocols::jd2::JobDistributorprotected
get_current_batch() const protocols::jd2::JobDistributor
get_instance()protocols::jd2::JobDistributorstatic
get_job_time_estimate() const protocols::jd2::JobDistributorprotected
get_jobs() const protocols::jd2::JobDistributorprotected
get_jobs_nonconst()protocols::jd2::JobDistributorprotected
get_new_job_id() overrideprotocols::jd2::VectorPoseJobDistributorvirtual
go(protocols::moves::MoverOP mover) overrideprotocols::jd2::VectorPoseJobDistributorvirtual
protocols::jd2::JobDistributor::go(protocols::moves::MoverOP mover, JobOutputterOP jo)protocols::jd2::JobDistributor
protocols::jd2::JobDistributor::go(protocols::moves::MoverOP mover, JobInputterOP ji)protocols::jd2::JobDistributor
protocols::jd2::JobDistributor::go(protocols::moves::MoverOP mover, JobInputterOP ji, JobOutputterOP jo)protocols::jd2::JobDistributor
go_main(protocols::moves::MoverOP mover)protocols::jd2::JobDistributorprotected
go_mpi(protocols::moves::MoverOP mover)protocols::jd2::VectorPoseJobDistributor
go_serial(protocols::moves::MoverOP mover)protocols::jd2::VectorPoseJobDistributor
handle_interrupt() overrideprotocols::jd2::VectorPoseJobDistributorvirtual
has_been_instantiated()protocols::jd2::JobDistributorstatic
increment_failed_jobs()protocols::jd2::JobDistributorinlineprotected
jd2_signal_handler(int Signal)protocols::jd2::JobDistributorprotectedstatic
job_failed(core::pose::Pose &, bool) overrideprotocols::jd2::VectorPoseJobDistributorvirtual
job_inputter() const protocols::jd2::JobDistributor
job_inputter_protocols::jd2::VectorPoseJobDistributorprivate
job_inputter_input_source() const protocols::jd2::JobDistributor
job_map_protocols::jd2::VectorPoseJobDistributorprivate
job_outputter() const protocols::jd2::JobDistributor
job_outputter_protocols::jd2::VectorPoseJobDistributorprivate
job_succeeded(core::pose::Pose &pose, core::Real run_time, std::string const &tag)protocols::jd2::JobDistributorprotectedvirtual
job_succeeded_additional_output(core::pose::Pose &pose, std::string const &tag)protocols::jd2::JobDistributorprotectedvirtual
JobDistributor()protocols::jd2::JobDistributorprotected
JobDistributor(bool empty)protocols::jd2::JobDistributorprotected
load_new_batch()protocols::jd2::JobDistributorprotectedvirtual
mark_current_job_id_for_repetition() overrideprotocols::jd2::VectorPoseJobDistributorvirtual
mark_job_as_bad(core::Size job_id)protocols::jd2::JobDistributorprotected
mark_job_as_completed(core::Size job_id, core::Real run_time)protocols::jd2::JobDistributorprotected
mpi_finalize(bool finalize)protocols::jd2::JobDistributorvirtual
next_batch()protocols::jd2::JobDistributorprotectedvirtual
note_all_jobs_finished()protocols::jd2::JobDistributorprotectedvirtual
nr_batches() const protocols::jd2::JobDistributorinlineprotected
number_jobs_protocols::jd2::VectorPoseJobDistributorprivate
obtain_new_job(bool re_consider_current_job=false)protocols::jd2::JobDistributorprotected
parser() const protocols::jd2::JobDistributorprotected
randomize_input_protocols::jd2::VectorPoseJobDistributorprivate
remove_bad_inputs_from_job_list()protocols::jd2::JobDistributorprotectedvirtual
remove_system_signal_handler()protocols::jd2::JobDistributorprotectedstatic
restart()protocols::jd2::JobDistributorvirtual
run_one_job(protocols::moves::MoverOP &mover, time_t allstarttime, std::string &last_inner_job_tag, std::string &last_output_tag, core::Size &last_batch_id, core::Size &retries_this_job, bool first_job)protocols::jd2::JobDistributorprotected
set_batch_id(core::Size setting)protocols::jd2::JobDistributorprotected
set_current_job_by_index(core::Size curr_job_index)protocols::jd2::JobDistributorprotected
set_job_inputter(JobInputterOP new_job_inputter)protocols::jd2::JobDistributor
set_job_outputter(const JobOutputterOP &new_job_outputter)protocols::jd2::JobDistributor
setup_pymol_observer(core::pose::Pose &pose)protocols::jd2::JobDistributorprotected
setup_system_signal_handler(void(*prev_fn)(int)=jd2_signal_handler)protocols::jd2::JobDistributorprotectedstatic
this_nodes_job_protocols::jd2::VectorPoseJobDistributorprivate
total_nr_jobs() const protocols::jd2::JobDistributorinline
using_parser() const protocols::jd2::JobDistributorprotected
VectorPoseJobDistributor()protocols::jd2::VectorPoseJobDistributor
write_citations_and_clear_citation_tracking() const protocols::jd2::JobDistributorprotected
write_output_from_job(core::pose::Pose &pose, protocols::moves::MoverOP mover_copy, protocols::moves::MoverStatus status, core::Size jobtime, core::Size &retries_this_job)protocols::jd2::JobDistributorprotected
~JobDistributor()protocols::jd2::JobDistributorvirtual
~VectorPoseJobDistributor() overrideprotocols::jd2::VectorPoseJobDistributor