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protocols::stepwise::monte_carlo::StepWiseMonteCarlo Member List

This is the complete list of members for protocols::stepwise::monte_carlo::StepWiseMonteCarlo, including all inherited members.

align_pose_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
anneal_missing(protocols::moves::MonteCarloOP monte_carlo)protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
apply(core::pose::Pose &pose) overrideprotocols::stepwise::monte_carlo::StepWiseMonteCarlovirtual
checkpoint_file_exists() constprotocols::stepwise::monte_carlo::StepWiseMonteCarlo
checkpoint_file_name() constprotocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
checkpoint_file_name_low() constprotocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() constprotocols::moves::Movervirtual
create()protocols::moves::Movervirtual
current_job_protocols::moves::Moverprivate
current_tag_protocols::moves::Moverprivate
display_progress(core::pose::Pose &pose, core::Size const cycle_num)protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
do_main_loop(core::pose::Pose &pose)protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
fresh_instance() constprotocols::moves::Movervirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() constprotocols::moves::Mover
get_current_tag() constprotocols::moves::Moverinline
get_input_pose() constprotocols::moves::Mover
get_last_move_status() constprotocols::moves::Mover
get_name() const overrideprotocols::stepwise::monte_carlo::StepWiseMonteCarloinlinevirtual
get_native_pose() constprotocols::moves::Mover
get_self_ptr() constprotocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() constprotocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() constprotocols::moves::Moverinline
info()protocols::moves::Moverinlinevirtual
info() constprotocols::moves::Moverinlinevirtual
info_protocols::moves::Moverprivate
initialize()protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
initialize_for_movie(core::pose::Pose const &pose)protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
initialize_scorefunction()protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
input_pose_protocols::moves::Moverprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
last_status_protocols::moves::Moverprivate
master_mover() constprotocols::stepwise::monte_carlo::StepWiseMonteCarloinline
master_mover_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
max_missing_weight_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
missing_weight_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
missing_weight_interval_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
model_tag() constprotocols::stepwise::monte_carlo::StepWiseMonteCarloinline
model_tag_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
move() constprotocols::stepwise::monte_carlo::StepWiseMonteCarloinline
move_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
movie_file_accepted_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
movie_file_trial_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
name()protocols::moves::Moverinlinestatic
native_pose_protocols::moves::Moverprivate
options() constprotocols::stepwise::monte_carlo::StepWiseMonteCarloinline
options_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
out_file_prefix_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
out_path() constprotocols::stepwise::monte_carlo::StepWiseMonteCarloinline
out_path_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
output_checkpoint_file(core::pose::Pose const &pose, core::pose::Pose const &low, core::Size const k) constprotocols::stepwise::monte_carlo::StepWiseMonteCarlo
output_movie(core::pose::Pose const &pose, core::Size const k, std::string const &tag, std::string const &movie_file)protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)protocols::moves::Movervirtual
Pose typedefprotocols::moves::Mover
pose_from_checkpoint_file() constprotocols::stepwise::monte_carlo::StepWiseMonteCarlo
pose_from_checkpoint_file_low() constprotocols::stepwise::monte_carlo::StepWiseMonteCarlo
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) constprotocols::moves::Movervirtual
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() constprotocols::moves::Movervirtual
reinitialize_for_new_input() constprotocols::moves::Movervirtual
remove_checkpoint_file() constprotocols::stepwise::monte_carlo::StepWiseMonteCarlo
reset_status()protocols::moves::Mover
scorefxn_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
scorefxn_input_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
set_align_pose(core::pose::PoseCOP pose)protocols::stepwise::monte_carlo::StepWiseMonteCarloinline
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_model_tag(std::string const &setting)protocols::stepwise::monte_carlo::StepWiseMonteCarloinline
set_move(mover::StepWiseMove const &setting)protocols::stepwise::monte_carlo::StepWiseMonteCarloinline
set_native_pose(core::pose::PoseCOP pose) overrideprotocols::stepwise::monte_carlo::StepWiseMonteCarlovirtual
set_options(options::StepWiseMonteCarloOptionsCOP options)protocols::stepwise::monte_carlo::StepWiseMonteCarlo
set_out_file_prefix(std::string const &setting)protocols::stepwise::monte_carlo::StepWiseMonteCarloinline
set_out_path(std::string const &setting)protocols::stepwise::monte_carlo::StepWiseMonteCarloinline
set_submotif_library(monte_carlo::submotif::SubMotifLibraryCOP setting)protocols::stepwise::monte_carlo::StepWiseMonteCarlo
set_type(std::string const &setting)protocols::moves::Moverinline
show(std::ostream &output=std::cout) constprotocols::moves::Movervirtual
show_scores(core::pose::Pose &pose, std::string const &tag)protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
start_time_protocols::stepwise::monte_carlo::StepWiseMonteCarloprivate
StepWiseMonteCarlo(core::scoring::ScoreFunctionCOP scorefxn)protocols::stepwise::monte_carlo::StepWiseMonteCarlo
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type(const std::string &type_in)protocols::moves::Moverinline
type() constprotocols::moves::Moverinline
type_protocols::moves::Moverprivate
~StepWiseMonteCarlo() overrideprotocols::stepwise::monte_carlo::StepWiseMonteCarlo