core::select::jump_selector::InterchainJumpSelector Class Reference

The InterchainJumpSelector returns a JumpSubset, i.e. a utility::vector1< bool > containing 'true' for jump where the take-off residue is on a different chain from the landing residue. More...

#include <InterchainJumpSelector.hh>

Inheritance diagram for core::select::jump_selector::InterchainJumpSelector:

Public Member Functions
	InterchainJumpSelector ()
	~InterchainJumpSelector () override
	InterchainJumpSelector (InterchainJumpSelector const &src)
	Copy constructor. More...
JumpSelectorOP	clone () const override
	Clone operator. More...
JumpSubset	apply (core::pose::Pose const &pose) const override
	Return a JumpSubset indicating a selection of Jumps from the input Pose; the JumpSubset is an array of booleans of length pose.num_jump() where a value of "true" for position i indicates that jump i is a part of the selected subset – and a value of "false" would indicate that it is not. More...
void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override
	Initialize any data members of this instance from an input tag and a DataMap object. More...
std::string	get_name () const override
Public Member Functions inherited from core::select::jump_selector::JumpSelector
	JumpSelector ()
	Constructor. More...
	~JumpSelector () override
	Destructor. More...
utility::vector1< core::Size >	selection_jumps (core::pose::Pose const &pose) const
	Calls apply and returns a vector of the selected jump ids. More...

Static Public Member Functions
static std::string	class_name ()
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

Detailed Description

The InterchainJumpSelector returns a JumpSubset, i.e. a utility::vector1< bool > containing 'true' for jump where the take-off residue is on a different chain from the landing residue.

Constructor & Destructor Documentation

InterchainJumpSelector() [1/2]

core::select::jump_selector::InterchainJumpSelector::InterchainJumpSelector ( )

default

~InterchainJumpSelector()

core::select::jump_selector::InterchainJumpSelector::~InterchainJumpSelector ( )

overridedefault

InterchainJumpSelector() [2/2]

core::select::jump_selector::InterchainJumpSelector::InterchainJumpSelector

(

InterchainJumpSelector const &

src

)

Copy constructor.

Member Function Documentation

apply()

JumpSubset core::select::jump_selector::InterchainJumpSelector::apply ( core::pose::Pose const &  pose ) const

overridevirtual

Return a JumpSubset indicating a selection of Jumps from the input Pose; the JumpSubset is an array of booleans of length pose.num_jump() where a value of "true" for position i indicates that jump i is a part of the selected subset – and a value of "false" would indicate that it is not.

Implements core::select::jump_selector::JumpSelector.

References core::conformation::Residue::chain(), core::kinematics::FoldTree::downstream_jump_residue(), core::pose::Pose::fold_tree(), core::pose::Pose::num_jump(), core::pose::Pose::residue(), and core::kinematics::FoldTree::upstream_jump_residue().

class_name()

std::string core::select::jump_selector::InterchainJumpSelector::class_name ( )

static

Referenced by get_name(), core::select::jump_selector::InterchainJumpSelectorCreator::keyname(), and provide_xml_schema().

clone()

JumpSelectorOP core::select::jump_selector::InterchainJumpSelector::clone ( ) const

overridevirtual

Clone operator.

Copy this object and return an owning pointer to the new object.

Implements core::select::jump_selector::JumpSelector.

get_name()

std::string core::select::jump_selector::InterchainJumpSelector::get_name ( ) const

overridevirtual

Implements core::select::jump_selector::JumpSelector.

References class_name().

parse_my_tag()

void core::select::jump_selector::InterchainJumpSelector::parse_my_tag ( utility::tag::TagCOP  tag, basic::datacache::DataMap &  datacache  )

overridevirtual

Initialize any data members of this instance from an input tag and a DataMap object.

Noop implementation in the base class in the case that a derived class has no need to read data from an input tag

Reimplemented from core::select::jump_selector::JumpSelector.

provide_xml_schema()

void core::select::jump_selector::InterchainJumpSelector::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

References class_name(), and core::select::jump_selector::xsd_type_definition_w_attributes().

Referenced by core::select::jump_selector::InterchainJumpSelectorCreator::provide_xml_schema().

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The documentation for this class was generated from the following files:

• src/core/select/jump_selector/InterchainJumpSelector.hh
• src/core/select/jump_selector/InterchainJumpSelector.cc