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protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinement Member List

This is the complete list of members for protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinement, including all inherited members.

apply(core::pose::Pose &pose) overrideprotocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementvirtual
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementvirtual
create()protocols::moves::Movervirtual
flags_protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
fresh_instance() const overrideprotocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementvirtual
ft_docking_protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
ft_substrate_protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
get_additional_output()protocols::moves::Movervirtual
get_current_job() const protocols::moves::Mover
get_current_tag() const protocols::moves::Moverinline
get_docking_foldtree()protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementinline
get_input_pose() const protocols::moves::Mover
get_last_move_status() const protocols::moves::Mover
get_name() const overrideprotocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementvirtual
get_native_pose() const protocols::moves::Mover
get_options()protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementinline
get_scorefunction()protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementinline
get_self_ptr() const protocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() const protocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_substrate_foldtree()protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementinline
get_type() const protocols::moves::Moverinline
GlycopeptideDockingLowResRefinement()protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinement
GlycopeptideDockingLowResRefinement(protocols::glycopeptide_docking::GlycopeptideDockingFlagsOP flags, core::scoring::ScoreFunctionOP sf, core::kinematics::FoldTreeOP ft_docking, core::kinematics::FoldTreeOP ft_substrate)protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinement
GlycopeptideDockingLowResRefinement(protocols::glycopeptide_docking::GlycopeptideDockingFlagsOP flags, core::scoring::ScoreFunctionOP sf)protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinement
GlycopeptideDockingLowResRefinement(GlycopeptideDockingLowResRefinement const &src)protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinement
info()protocols::moves::Moverinlinevirtual
info() const protocols::moves::Moverinlinevirtual
jump_minimizer_protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
mc_protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
mover_name()protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementstatic
name()protocols::moves::Moverinlinestatic
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)protocols::moves::Movervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const protocols::moves::Movervirtual
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() const protocols::moves::Movervirtual
reinitialize_for_new_input() const protocols::moves::Movervirtual
reset_status()protocols::moves::Mover
sample_torsions(core::pose::Pose &pose, core::Size cycles, core::Real &acceptance_rate, core::kinematics::MoveMapOP mm)protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_docking_foldtree(core::kinematics::FoldTreeOP ft_docking)protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_options(protocols::glycopeptide_docking::GlycopeptideDockingFlagsOP flags)protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementinline
set_scorefunction(core::scoring::ScoreFunctionOP sf)protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementinline
set_substrate_foldtree(core::kinematics::FoldTreeOP ft_substrate)protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementinline
set_type(std::string const &setting)protocols::moves::Moverinline
setup_backbone_and_jump_movemap()protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
sf_protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
show(std::ostream &output=std::cout) const overrideprotocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementvirtual
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
torsion_minimizer_protocols::glycopeptide_docking::GlycopeptideDockingLowResRefinementprivate
type(const std::string &type_in)protocols::moves::Moverinline
type() const protocols::moves::Moverinline
~GlycopeptideDockingLowResRefinement() overrideprotocols::glycopeptide_docking::GlycopeptideDockingLowResRefinement