Public Types | Public Member Functions | Private Member Functions | Private Attributes | List of all members
protocols::protein_interface_design::FavorNonNativeResidue Class Reference

#include <design_utils.hh>

Public Types

typedef core::pose::Pose Pose
typedef core::Real Real

Public Member Functions

 FavorNonNativeResidue (Pose &pose, Real const native_residue_bonus)
 FavorNonNativeResidue (Pose &pose, utility::vector1< Real > const &native_residue_bonus)
virtual ~FavorNonNativeResidue ()=default

Private Member Functions

void add_residue_constraints (Pose &pose) const

Private Attributes

utility::vector1< Realnon_native_residue_bonus_

Detailed Description

class FavorNonNativeResidue changes a pose object so that its residue identities at the initialization of FavorNonNativeResidue are kept in memory. If the res_type_constraint score term is set to a value other than 0, an energy bonus will be assigned if the residue changes. This is useful if we want to encourage mutation. A negative score would discourage mutation.

Member Typedef Documentation

◆ Pose

◆ Real

Constructor & Destructor Documentation

◆ FavorNonNativeResidue() [1/2]

protocols::protein_interface_design::FavorNonNativeResidue::FavorNonNativeResidue ( Pose pose,
core::Real const  non_native_residue_bonus 

◆ FavorNonNativeResidue() [2/2]

protocols::protein_interface_design::FavorNonNativeResidue::FavorNonNativeResidue ( Pose pose,
utility::vector1< Real > const &  native_residue_bonus 

◆ ~FavorNonNativeResidue()

virtual protocols::protein_interface_design::FavorNonNativeResidue::~FavorNonNativeResidue ( )

Member Function Documentation

◆ add_residue_constraints()

void protocols::protein_interface_design::FavorNonNativeResidue::add_residue_constraints ( pose::Pose pose) const

Member Data Documentation

◆ non_native_residue_bonus_

utility::vector1< Real > protocols::protein_interface_design::FavorNonNativeResidue::non_native_residue_bonus_

The documentation for this class was generated from the following files: