#include <design_utils.hh>

Public Types
typedef core::pose::Pose	Pose

typedef core::Real	Real

Public Member Functions
	FavorNonNativeResidue (Pose &pose, Real const native_residue_bonus)

	FavorNonNativeResidue (Pose &pose, utility::vector1< Real > const &native_residue_bonus)

virtual	~FavorNonNativeResidue ()=default

Private Member Functions
void	add_residue_constraints (Pose &pose) const

Private Attributes
utility::vector1< Real >	non_native_residue_bonus_

Detailed Description

class FavorNonNativeResidue changes a pose object so that its residue identities at the initialization of FavorNonNativeResidue are kept in memory. If the res_type_constraint score term is set to a value other than 0, an energy bonus will be assigned if the residue changes. This is useful if we want to encourage mutation. A negative score would discourage mutation.

Member Typedef Documentation

◆ Pose

typedef core::pose::Pose protocols::protein_interface_design::FavorNonNativeResidue::Pose

◆ Real

typedef core::Real protocols::protein_interface_design::FavorNonNativeResidue::Real

Constructor & Destructor Documentation

◆ FavorNonNativeResidue() [1/2]

protocols::protein_interface_design::FavorNonNativeResidue::FavorNonNativeResidue	(	Pose &	pose,
		core::Real const	non_native_residue_bonus
	)

References core::pose::Pose::size().

◆ FavorNonNativeResidue() [2/2]

protocols::protein_interface_design::FavorNonNativeResidue::FavorNonNativeResidue	(	Pose &	pose,
		utility::vector1< Real > const &	native_residue_bonus
	)

References core::pose::Pose::size().

◆ ~FavorNonNativeResidue()

virtual protocols::protein_interface_design::FavorNonNativeResidue::~FavorNonNativeResidue ( )

virtualdefault

Member Function Documentation

◆ add_residue_constraints()

void protocols::protein_interface_design::FavorNonNativeResidue::add_residue_constraints ( pose::Pose & pose ) const

private

References core::pose::Pose::add_constraint(), and core::pose::Pose::size().

Member Data Documentation

◆ non_native_residue_bonus_

utility::vector1< Real > protocols::protein_interface_design::FavorNonNativeResidue::non_native_residue_bonus_