Rosetta  2021.16
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
Classes | Typedefs | Functions
protocols::loop_grower Namespace Reference

Classes

class  DensSkeleton
 
class  FragmentExtension
 
class  FragmentExtensionCreator
 
class  LoopComparator
 
class  LoopGrower
 
class  LoopPartialSolution
 
class  LoopPartialSolutionStore
 
struct  ResTorsions
 
struct  RMSComparator
 
struct  SheetPositions
 
class  SheetSampler
 

Typedefs

typedef
utility::pointer::shared_ptr
< DensSkeleton
DensSkeletonOP
 
typedef
utility::pointer::shared_ptr
< DensSkeleton const > 
DensSkeletonCOP
 
typedef
utility::pointer::shared_ptr
< FragmentExtension
FragmentExtensionOP
 
typedef
utility::pointer::shared_ptr
< FragmentExtension const > 
FragmentExtensionCOP
 
typedef
utility::pointer::shared_ptr
< LoopGrower
LoopGrowerOP
 
typedef
utility::pointer::shared_ptr
< LoopGrower const > 
LoopGrowerCOP
 
typedef
utility::pointer::shared_ptr
< SheetSampler
SheetSamplerOP
 
typedef
utility::pointer::shared_ptr
< SheetSampler const > 
SheetSamplerCOP
 

Functions

static basic::Tracer TR ("protocols.loop_grower.FragmentExtension")
 
std::string fragext_subelement_ct_name (std::string const &name)
 
core::Real gapdist (int n)
 
static basic::Tracer TRACER ("protocols.loop_grower.LoopGrower")
 
void printxyz (numeric::xyzVector< core::Real > printvec)
 
static basic::Tracer TR ("protocols.loop_grower.SheetSampler")
 
static basic::Tracer TR ("protocols.loop_grower.util")
 
void transform_res_to_subunit (core::pose::Pose &pose, core::conformation::ResidueOP xformed, core::Size symmcopy)
 
void transform_to_closest_symmunit (core::pose::Pose &cen_pose, core::pose::Pose &fa_pose, core::Size lower_pose)
 

Typedef Documentation

typedef utility::pointer::shared_ptr< DensSkeleton const > protocols::loop_grower::DensSkeletonCOP
typedef utility::pointer::shared_ptr< DensSkeleton > protocols::loop_grower::DensSkeletonOP
typedef utility::pointer::shared_ptr< FragmentExtension const > protocols::loop_grower::FragmentExtensionCOP
typedef utility::pointer::shared_ptr< FragmentExtension > protocols::loop_grower::FragmentExtensionOP
typedef utility::pointer::shared_ptr< LoopGrower const > protocols::loop_grower::LoopGrowerCOP
typedef utility::pointer::shared_ptr< LoopGrower > protocols::loop_grower::LoopGrowerOP
typedef utility::pointer::shared_ptr< SheetSampler const > protocols::loop_grower::SheetSamplerCOP
typedef utility::pointer::shared_ptr< SheetSampler > protocols::loop_grower::SheetSamplerOP

Function Documentation

std::string protocols::loop_grower::fragext_subelement_ct_name ( std::string const &  name)
core::Real protocols::loop_grower::gapdist ( int  n)
void protocols::loop_grower::printxyz ( numeric::xyzVector< core::Real printvec)

References TR().

static basic::Tracer protocols::loop_grower::TR ( "protocols.loop_grower.util"  )
static
static basic::Tracer protocols::loop_grower::TR ( "protocols.loop_grower.SheetSampler"  )
static
static basic::Tracer protocols::loop_grower::TR ( "protocols.loop_grower.FragmentExtension"  )
static
static basic::Tracer protocols::loop_grower::TRACER ( "protocols.loop_grower.LoopGrower"  )
static
void protocols::loop_grower::transform_res_to_subunit ( core::pose::Pose pose,
core::conformation::ResidueOP  xformed,
core::Size  symmcopy 
)
void protocols::loop_grower::transform_to_closest_symmunit ( core::pose::Pose cen_pose,
core::pose::Pose fa_pose,
core::Size  lower_pose 
)