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core::scoring::rna::RNP_LowResPairDistPotential Class Reference

#include <RNP_LowResPairDistPotential.hh>

Inheritance diagram for core::scoring::rna::RNP_LowResPairDistPotential:
Inheritance graph
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Public Member Functions

 RNP_LowResPairDistPotential ()
 c-tor More...
 
void initialize_rnp_pair_dist ()
 
void evaluate_rnp_pair_dist_score (conformation::Residue const &rsd1, conformation::Residue const &rsd2, Real &rnp_pair_dist_score) const
 
Real calc_rnp_pair_dist_score (conformation::Residue const &protein_rsd, conformation::Residue const &RNA_rsd) const
 
Size convert_aa_to_index (char const c) const
 

Private Attributes

Size const max_aa_ = 25
 
Size const max_base_ = 8
 
Size const num_dbins_ = 10
 
bool use_actual_centroid_
 
utility::vector1< std::string > RNA_atoms_
 
utility::vector1< std::string > protein_atoms_
 
ObjexxFCL::FArray3D< Realrnp_pair_dist_potential_
 

Constructor & Destructor Documentation

core::scoring::rna::RNP_LowResPairDistPotential::RNP_LowResPairDistPotential ( )

c-tor

Member Function Documentation

Real core::scoring::rna::RNP_LowResPairDistPotential::calc_rnp_pair_dist_score ( conformation::Residue const &  protein_rsd,
conformation::Residue const &  RNA_rsd 
) const
Size core::scoring::rna::RNP_LowResPairDistPotential::convert_aa_to_index ( char const  c) const
void core::scoring::rna::RNP_LowResPairDistPotential::evaluate_rnp_pair_dist_score ( conformation::Residue const &  rsd1,
conformation::Residue const &  rsd2,
Real rnp_pair_dist_score 
) const
void core::scoring::rna::RNP_LowResPairDistPotential::initialize_rnp_pair_dist ( )

Member Data Documentation

Size const core::scoring::rna::RNP_LowResPairDistPotential::max_aa_ = 25
private
Size const core::scoring::rna::RNP_LowResPairDistPotential::max_base_ = 8
private
Size const core::scoring::rna::RNP_LowResPairDistPotential::num_dbins_ = 10
private
utility::vector1< std::string > core::scoring::rna::RNP_LowResPairDistPotential::protein_atoms_
private
utility::vector1< std::string > core::scoring::rna::RNP_LowResPairDistPotential::RNA_atoms_
private
ObjexxFCL::FArray3D< Real > core::scoring::rna::RNP_LowResPairDistPotential::rnp_pair_dist_potential_
private
bool core::scoring::rna::RNP_LowResPairDistPotential::use_actual_centroid_
private

The documentation for this class was generated from the following files: