Rosetta  2021.16
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protocols::toolbox::DecoySetEvaluation Member List

This is the complete list of members for protocols::toolbox::DecoySetEvaluation, including all inherited members.

all_energies() const protocols::toolbox::DecoySetEvaluationinline
all_energies_protocols::toolbox::DecoySetEvaluationprivate
center_all(ObjexxFCL::FArray1_double const &weights)protocols::toolbox::DecoySetEvaluation
center_structure(core::Size i)protocols::toolbox::DecoySetEvaluation
center_structure(core::Size i, ObjexxFCL::FArray1_double const &weights)protocols::toolbox::DecoySetEvaluation
clear()protocols::toolbox::DecoySetEvaluationinline
COMprotocols::toolbox::DecoySetEvaluationprivate
compute_average_structure(ObjexxFCL::FArray2_double &average_structure) const protocols::toolbox::DecoySetEvaluation
compute_distance_matrix(ObjexxFCL::FArray2D_double &) const protocols::toolbox::DecoySetEvaluation
coords() const protocols::toolbox::DecoySetEvaluationinline
coords(core::Size i) const protocols::toolbox::DecoySetEvaluationinline
coords_protocols::toolbox::DecoySetEvaluationprivate
create_dist_constraints(core::scoring::constraints::ConstraintSet &cst_set) const protocols::toolbox::DecoySetEvaluation
create_dist_constraints_median(core::scoring::constraints::ConstraintSet &cst_set) const protocols::toolbox::DecoySetEvaluation
create_xyz_constraints_median(core::scoring::constraints::ConstraintSet &cst_set, core::pose::Pose const &ref_pose, core::Size root) const protocols::toolbox::DecoySetEvaluation
DecoySetEvaluation()protocols::toolbox::DecoySetEvaluation
find_closest_to_average(ObjexxFCL::FArray2_double &average_structure) const protocols::toolbox::DecoySetEvaluation
n_atoms() const protocols::toolbox::DecoySetEvaluationinline
n_atoms_protocols::toolbox::DecoySetEvaluationprivate
n_decoys() const protocols::toolbox::DecoySetEvaluationinline
n_decoys_protocols::toolbox::DecoySetEvaluationprivate
n_decoys_max() const protocols::toolbox::DecoySetEvaluationinline
n_decoys_max_protocols::toolbox::DecoySetEvaluationprivate
options_registered_protocols::toolbox::DecoySetEvaluationprivatestatic
pop_back_CA_xyz()protocols::toolbox::DecoySetEvaluation
prepare_push_back(core::Size nres)protocols::toolbox::DecoySetEvaluationprivate
push_back(core::pose::Pose &pose)protocols::toolbox::DecoySetEvaluation
push_back_CA_xyz(ObjexxFCL::FArray2_double const &, core::Size nres)protocols::toolbox::DecoySetEvaluation
push_back_CA_xyz_from_silent_file(core::io::silent::SilentFileData const &sfd, bool store_energies)protocols::toolbox::DecoySetEvaluation
push_back_CA_xyz_from_silent_file(core::Size n_decoys, SilentStructIterator begin, SilentStructIterator end, bool store_energies)protocols::toolbox::DecoySetEvaluation
ref_pose()protocols::toolbox::DecoySetEvaluationinline
ref_pose_protocols::toolbox::DecoySetEvaluationprivate
ref_structure_protocols::toolbox::DecoySetEvaluationprivate
register_options()protocols::toolbox::DecoySetEvaluationstatic
reserve(core::Size n_decoys_)protocols::toolbox::DecoySetEvaluation
rmsd(ObjexxFCL::FArray1_double const &weights, ObjexxFCL::FArray2_double &xx_ref, ObjexxFCL::FArray2_double &xx) const protocols::toolbox::DecoySetEvaluation
rmsf(utility::vector1< core::Real > &results)protocols::toolbox::DecoySetEvaluation
rmsf(ObjexxFCL::FArray1_double &result)protocols::toolbox::DecoySetEvaluation
rmsf(core::Size pos)protocols::toolbox::DecoySetEvaluationprivate
set_all_energies(utility::vector1< core::Real > const &all_energies)protocols::toolbox::DecoySetEvaluationinline
set_n_atom(core::Size natoms)protocols::toolbox::DecoySetEvaluation
set_weights(ObjexxFCL::FArray1_double const &weights)protocols::toolbox::DecoySetEvaluation
store_energies_protocols::toolbox::DecoySetEvaluationprivate
superimpose(core::Size icenter=1)protocols::toolbox::DecoySetEvaluation
superimpose(ObjexxFCL::FArray1_double const &weights, core::Size icenter=1)protocols::toolbox::DecoySetEvaluationprivate
weights_protocols::toolbox::DecoySetEvaluationprivate
wRMSD(core::Real sigma2, core::Real tolerance, ObjexxFCL::FArray1_double &weights)protocols::toolbox::DecoySetEvaluation
~DecoySetEvaluation() overrideprotocols::toolbox::DecoySetEvaluation