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core::pack::task::operation::DisallowIfNonnativeRLT Class Reference

#include <ResLvlTaskOperations.hh>

Inheritance diagram for core::pack::task::operation::DisallowIfNonnativeRLT:
Inheritance graph
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Public Types

typedef ResLvlTaskOperation parent
 
- Public Types inherited from core::pack::task::operation::ResLvlTaskOperation
typedef utility::tag::TagCOP TagCOP
 

Public Member Functions

 DisallowIfNonnativeRLT ()
 
 DisallowIfNonnativeRLT (utility::vector1< bool > disallowed_aas)
 
 ~DisallowIfNonnativeRLT () override
 
ResLvlTaskOperationOP clone () const override
 Create another task operation of the type matching the most-derived version of the class. More...
 
void apply (ResidueLevelTask &rlt) const override
 Change a ResidueLevelTask in some way. The input pose is the one to which the input task will be later applied. More...
 
void clear ()
 
void disallow_aas (utility::vector1< bool > const &cannonical_disallowed)
 
void disallow_aas (std::string const &aa_string)
 
void parse_tag (TagCOP) override
 parser xml-like tags to set class data/parameters More...
 

Static Public Member Functions

static std::string keyname ()
 
static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
 

Private Member Functions

utility::vector1< boolinvert_vector (utility::vector1< bool > disallowed_aas)
 

Private Attributes

utility::vector1< booldisallowed_aas_
 
utility::vector1< boolallowed_aas_
 

Member Typedef Documentation

Constructor & Destructor Documentation

core::pack::task::operation::DisallowIfNonnativeRLT::DisallowIfNonnativeRLT ( )
core::pack::task::operation::DisallowIfNonnativeRLT::DisallowIfNonnativeRLT ( utility::vector1< bool disallowed_aas)
core::pack::task::operation::DisallowIfNonnativeRLT::~DisallowIfNonnativeRLT ( )
overridedefault

Member Function Documentation

void core::pack::task::operation::DisallowIfNonnativeRLT::apply ( ResidueLevelTask ) const
overridevirtual

Change a ResidueLevelTask in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::ResLvlTaskOperation.

References allowed_aas_, core::chemical::num_canonical_aas, and core::pack::task::ResidueLevelTask::restrict_nonnative_canonical_aas().

void core::pack::task::operation::DisallowIfNonnativeRLT::clear ( )

References allowed_aas_, and disallowed_aas_.

ResLvlTaskOperationOP core::pack::task::operation::DisallowIfNonnativeRLT::clone ( ) const
overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::ResLvlTaskOperation.

Referenced by protocols::fold_from_loops::NubInitioMover::repack(), and protocols::fold_from_loops::movers::NubInitioLoopClosureMover::repack().

void core::pack::task::operation::DisallowIfNonnativeRLT::disallow_aas ( utility::vector1< bool > const &  cannonical_disallowed)
void core::pack::task::operation::DisallowIfNonnativeRLT::disallow_aas ( std::string const &  aa_string)
utility::vector1< bool > core::pack::task::operation::DisallowIfNonnativeRLT::invert_vector ( utility::vector1< bool disallowed_aas)
private

Referenced by disallow_aas().

std::string core::pack::task::operation::DisallowIfNonnativeRLT::keyname ( )
static
void core::pack::task::operation::DisallowIfNonnativeRLT::parse_tag ( TagCOP  )
overridevirtual

parser xml-like tags to set class data/parameters

Reimplemented from core::pack::task::operation::ResLvlTaskOperation.

References disallow_aas().

void core::pack::task::operation::DisallowIfNonnativeRLT::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)
static

Member Data Documentation

utility::vector1< bool > core::pack::task::operation::DisallowIfNonnativeRLT::allowed_aas_
private

Referenced by apply(), clear(), and disallow_aas().

utility::vector1< bool > core::pack::task::operation::DisallowIfNonnativeRLT::disallowed_aas_
private

Referenced by clear(), and disallow_aas().


The documentation for this class was generated from the following files: