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protocols::ligand_docking::ga_ligand_dock::EntropyEstimator Member List

This is the complete list of members for protocols::ligand_docking::ga_ligand_dock::EntropyEstimator, including all inherited members.

analyze_trajectory(utility::vector1< ChiInfo > const &chitrj, core::pose::Pose const &pose, utility::vector1< std::pair< core::Size, core::Size > > const &chidefs, core::Real const Emin, core::Real const RT, bool const run_on_ligand, bool const run_on_receptor) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
apply(core::pose::Pose const &pose) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimator
chimapping_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
chis2rotid(utility::vector1< core::Real > const &chis) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
chiweights_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
EntropyEstimator(core::scoring::ScoreFunctionOP sfxn, core::pose::Pose const &pose, utility::vector1< core::Size > const &ligids)protocols::ligand_docking::ga_ligand_dock::EntropyEstimator
estimate_Stors(core::pose::Pose pose, utility::vector1< ChiInfo > &chitrj, utility::vector1< core::Size > const &flexscs, utility::vector1< std::pair< core::Size, core::Size > > const &chidefs, bool const run_on_ligand, bool const run_on_receptor) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
get_chi_weight(core::pose::Pose const &pose_ref)protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
get_contacting_reslist(core::pose::Pose const &pose, utility::vector1< std::pair< core::Size, core::Size > > &chidefs) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
get_temperature(core::Size const it) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
iter_collect_begin_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
jumpid_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
ligids_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
ligpose_chimapping_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
maxpert_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
minimize_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
niter_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
P_randomize_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
perturb(core::pose::Pose &pose, core::Size const nligchi, utility::vector1< core::Size > const &flexscs, bool &pert_ligand) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
run_apostate_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
run_holostate_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
sample_every_iter_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
set_niter(core::Size setting)protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorinline
setup_trj(core::pose::Pose const &pose, utility::vector1< core::Size > &flexscs, utility::vector1< std::pair< core::Size, core::Size > > &chidefs) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
sfxn_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
temp_f_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
temp_i_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
update_chis(core::pose::Pose const &pose, utility::vector1< core::Real > &chis, bool const &ligonly) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
update_flexscs(core::pose::Pose const &pose, utility::vector1< std::pair< core::Size, core::Size > > const &chidefs, std::map< core::Size, utility::vector1< core::Real > > &chis) const protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
weighted_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
wRG_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
wtors_protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorprivate
~EntropyEstimator()protocols::ligand_docking::ga_ligand_dock::EntropyEstimatorinline