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Namespaces | Functions
InputStreamWithResidueInfo.cc File Reference
#include <protocols/stepwise/modeler/protein/InputStreamWithResidueInfo.hh>
#include <core/chemical/ResidueType.hh>
#include <core/types.hh>
#include <core/pose/Pose.hh>
#include <core/pose/variant_util.hh>
#include <core/pose/rna/util.hh>
#include <core/pose/copydofs/util.hh>
#include <core/import_pose/pose_stream/ExtendedPoseInputStream.hh>
#include <core/import_pose/pose_stream/PoseInputStream.fwd.hh>
#include <core/import_pose/pose_stream/PDBPoseInputStream.hh>
#include <core/import_pose/pose_stream/SilentFilePoseInputStream.hh>
#include <protocols/stepwise/legacy/modeler/protein/StepWiseProteinPoseSetup.hh>
#include <core/scoring/rms_util.hh>
#include <protocols/stepwise/modeler/align/util.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/in.OptionKeys.gen.hh>
#include <basic/options/keys/stepwise.OptionKeys.gen.hh>
#include <basic/Tracer.hh>
#include <utility>
#include <utility/exit.hh>
#include <string>
#include <utility/vector1.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::stepwise
 
 protocols::stepwise::modeler
 
 protocols::stepwise::modeler::protein
 

Functions

static basic::Tracer TR ("protocols.stepwise.modeler.protein.InputStreamWithResidueInfo")
 
import_pose::pose_stream::PoseInputStreamOP protocols::stepwise::modeler::protein::setup_pose_input_stream (utility::options::StringVectorOption const &option_s1, utility::options::StringVectorOption const &option_silent1, utility::options::StringVectorOption const &option_tags1)
 
void protocols::stepwise::modeler::protein::initialize_input_streams (utility::vector1< protocols::stepwise::modeler::protein::InputStreamWithResidueInfoOP > &input_streams)
 
void protocols::stepwise::modeler::protein::initialize_input_streams_with_residue_info (utility::vector1< InputStreamWithResidueInfoOP > &input_streams_with_residue_info, utility::vector1< std::string > const &pdb_tags, utility::vector1< std::string > const &silent_files_in, utility::vector1< core::Size > const &input_res, utility::vector1< core::Size > const &input_res2)
 

Function Documentation

static basic::Tracer TR ( "protocols.stepwise.modeler.protein.InputStreamWithResidueInfo"  )
static