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protocols::canonical_sampling::mc_convergence_checks::HPool_RMSD Member List

This is the complete list of members for protocols::canonical_sampling::mc_convergence_checks::HPool_RMSD, including all inherited members.

add(ObjexxFCL::FArray2D_double &, std::string &)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprotected
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::add(core::io::silent::SilentStruct const &, std::string new_tag="keep_silent_tag")protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::add(core::pose::Pose const &, std::string new_tag)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::add(ObjexxFCL::FArray2D_double const &, core::Size nres, std::string new_tag)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
build_pair_dis_matrix()protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
clear()protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
clear_lib(const core::Size)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSD
coords() const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinlineprotected
debug()protocols::canonical_sampling::mc_convergence_checks::HPool_RMSD
dist_square(ObjexxFCL::FArray2_double &, ObjexxFCL::FArray2_double &)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
dist_square(core::Size, core::Size)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
evaluate(core::pose::Pose &pose, core::Real resolution, std::string &best_decoy, core::Real &best_rmsd)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSD
evaluate(core::io::silent::SilentStruct &pss, core::Real resolution, std::string &best_decoy, core::Real &best_rmsd)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSD
evaluate(ObjexxFCL::FArray2D_double &coord, core::Real resolution, std::string &best_decoy, core::Real &best_rmsd)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprotected
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::evaluate(core::pose::Pose const &, std::string &best_decoy, core::Real &best_rmsd) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::evaluate(core::io::silent::SilentStruct const &, std::string &best_decoy, core::Real &best_rmsd) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::evaluate(ObjexxFCL::FArray2D_double &, std::string &best_decoy, core::Real &best_rmsd) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD::evaluate(ObjexxFCL::FArray2D_double &, std::string &best_decoy, core::Real &best_rmsd, core::Size index) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate_and_add(core::pose::Pose const &pose, std::string &cluster_center, core::Real &best_rmsd, core::Real transition_threshold)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDvirtual
evaluate_and_add(ObjexxFCL::FArray2D_double &coords, std::string &best_decoy, core::Real &best_rmsd, core::Real transition_threshold)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
evaluate_core(ObjexxFCL::FArray2D_double &coord, std::string &best_decoy, core::Real &best_rmsd, core::Size index) const protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprotected
finalize()protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinlinevirtual
get(core::Size index, ObjexxFCL::FArray2D_double &result)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
get_pair_dist(core::Size, core::Size) const protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
get_size(core::Size nsubc)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDinline
get_tag(core::Size index)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
has_child_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
HPool_RMSD(std::string silent_file, core::Size lv=1)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSD
level_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
load_lib(const core::Size)protocols::canonical_sampling::mc_convergence_checks::HPool_RMSD
n_extra_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
natom() const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinlineprotected
old_size_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
pair_dis_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
Pool_RMSD(std::string silent_file)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinline
Pool_RMSD()protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinline
pop_back()protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
radius_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
set_excluded_residues(utility::vector1< core::Size > const &excluded_residues)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
set_reserve_size(int max_size)protocols::canonical_sampling::mc_convergence_checks::Pool_RMSD
silent_file_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
size() const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinline
sub_ndx_deque_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
subpools_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
tag(core::Size index) const protocols::canonical_sampling::mc_convergence_checks::Pool_RMSDinlineprotected
tag_prefix_protocols::canonical_sampling::mc_convergence_checks::HPool_RMSDprivate
~Pool_RMSD() overrideprotocols::canonical_sampling::mc_convergence_checks::Pool_RMSD