protocols::jumping::RandomSheetBuilder Class Reference

select jumps to build a given topology this class encapsulates the functionality of choose_random_pairings in jumping_pairings.cc of Rosetta++ More...

#include <RandomSheetBuilder.hh>

Inheritance diagram for protocols::jumping::RandomSheetBuilder:

Public Member Functions
	RandomSheetBuilder (core::fragment::SecondaryStructureOP, core::scoring::dssp::PairingsList const &, SheetTopology const &)
Public Member Functions inherited from protocols::jumping::SheetBuilder
	SheetBuilder (core::fragment::SecondaryStructureOP, core::scoring::dssp::PairingsList const &, SheetTopology const &)
	SheetBuilder (SheetBuilder const &)
	~SheetBuilder () override
std::string	type_name () const override
JumpSample	create_jump_sample () const override
JumpSample	clean_jumps (JumpSample const &js) const override
	take from a given JumpSample only those Jumps, which could also have been created by create_jump_sample() More...
core::Size	total_residue () const
Public Member Functions inherited from protocols::jumping::BaseJumpSetup
	~BaseJumpSetup () override
	Automatically generated virtual destructor for class deriving directly from VirtualBase. More...
virtual core::fragment::FragSetOP	generate_jump_frags (JumpSample const &, core::kinematics::MoveMap const &mm) const
	returns an ordered FragSet that is compatible with the JumpSample default: generate jumps from ss-library according to JumpSample More...

Protected Member Functions
SheetTopology	create_new_random_topol () const override
std::string	type_name () const override

Private Attributes
SheetTopology	input_sheet_sizes_

Additional Inherited Members
Public Types inherited from protocols::jumping::SheetBuilder
typedef utility::vector1 < core::Size >	SheetTopology

Detailed Description

select jumps to build a given topology this class encapsulates the functionality of choose_random_pairings in jumping_pairings.cc of Rosetta++

Constructor & Destructor Documentation

protocols::jumping::RandomSheetBuilder::RandomSheetBuilder	(	core::fragment::SecondaryStructureOP	ss,
		core::scoring::dssp::PairingsList const &	pairings,
		SheetTopology const &	sheet_topol
	)

Member Function Documentation

SheetBuilder::SheetTopology protocols::jumping::RandomSheetBuilder::create_new_random_topol ( ) const

overrideprotectedvirtual

Reimplemented from protocols::jumping::SheetBuilder.

References input_sheet_sizes_, protocols::mean_field::max(), core::scoring::rg, and protocols::jumping::tr().

std::string protocols::jumping::RandomSheetBuilder::type_name ( ) const

inlineoverrideprotectedvirtual

Implements protocols::jumping::BaseJumpSetup.

Member Data Documentation

SheetTopology protocols::jumping::RandomSheetBuilder::input_sheet_sizes_

private

Referenced by create_new_random_topol().

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The documentation for this class was generated from the following files:

• src/protocols/jumping/RandomSheetBuilder.hh
• src/protocols/jumping/RandomSheetBuilder.cc