Rosetta
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#include <ReportFilter.hh>
Public Member Functions | |
ReportFilter () | |
bool | apply (core::pose::Pose const &pose) const override |
Returns true if the given pose passes the filter, false otherwise. More... | |
filters::FilterOP | clone () const override |
filters::FilterOP | fresh_instance () const override |
void | report (std::ostream &out, core::pose::Pose const &pose) const override |
core::Real | report_sm (core::pose::Pose const &pose) const override |
used to report filter internals through a score or silent file More... | |
core::Real | compute (core::pose::Pose const &pose) const |
~ReportFilter () override | |
void | parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override |
Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing. More... | |
void | report_string (std::string const &s) |
std::string | report_string () const |
void | filter (protocols::filters::FilterOP f) |
protocols::filters::FilterOP | filter () const |
std::string | report_filter_name () const |
core::Real | filter_val () const |
std::string | checkpointing_file () const |
void | checkpointing_file (std::string const &s) |
std::string | name () const override |
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Filter () | |
Filter (std::string const &) | |
~Filter () override | |
virtual std::string | get_type () const |
std::string | get_user_defined_name () const |
void | set_user_defined_name (std::string const &name) |
virtual void | clear () |
used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More... | |
virtual core::Real | score (core::pose::Pose &pose) |
virtual void | provide_citation_info (basic::citation_manager::CitationCollectionList &) const |
Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More... | |
Static Public Member Functions | |
static std::string | class_name () |
static void | provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd) |
Private Member Functions | |
void | checkpoint_read () const |
void | checkpoint_write () const |
Private Attributes | |
utility::pointer::shared_ptr< basic::datacache::DataMapObj< std::string > > | report_string_ |
protocols::filters::FilterOP | filter_ |
std::string | report_filter_name_ |
core::Real | filter_val_ |
std::string | checkpointing_file_ |
Additional Inherited Members | |
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std::string | scorename_ |
protocols::simple_filters::ReportFilter::ReportFilter | ( | ) |
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overridedefault |
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overridevirtual |
Returns true if the given pose passes the filter, false otherwise.
Implements protocols::filters::Filter.
References checkpoint_read(), checkpoint_write(), compute(), and filter_val_.
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private |
References checkpointing_file(), checkpointing_file_, filter_val(), filter_val_, and protocols::simple_filters::TR().
Referenced by apply(), and report_sm().
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private |
References checkpointing_file(), checkpointing_file_, filter_val(), and protocols::simple_filters::TR().
Referenced by apply().
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inline |
References checkpointing_file_.
Referenced by checkpoint_read(), checkpoint_write(), and parse_my_tag().
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inline |
References checkpointing_file_.
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static |
Referenced by protocols::simple_filters::ReportFilterCreator::keyname(), name(), and provide_xml_schema().
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inlineoverridevirtual |
Implements protocols::filters::Filter.
core::Real protocols::simple_filters::ReportFilter::compute | ( | core::pose::Pose const & | pose | ) | const |
References filter(), and report_sm().
Referenced by apply().
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inline |
References filter_.
Referenced by compute(), and parse_my_tag().
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inline |
References filter_.
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inline |
References filter_val_.
Referenced by checkpoint_read(), checkpoint_write(), report(), and report_sm().
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inlineoverridevirtual |
Implements protocols::filters::Filter.
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overridevirtual |
Reimplemented from protocols::filters::Filter.
References class_name().
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overridevirtual |
Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing.
Reimplemented from protocols::filters::Filter.
References checkpointing_file(), filter(), protocols::rosetta_scripts::parse_filter(), report_filter_name_, report_string_, and protocols::simple_filters::TR().
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static |
References class_name(), and protocols::filters::xsd_type_definition_w_attributes().
Referenced by protocols::simple_filters::ReportFilterCreator::provide_xml_schema().
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overridevirtual |
Reimplemented from protocols::filters::Filter.
References protocols::jd2::current_output_name(), filter_, filter_val(), core::conformation::membrane::out, report_filter_name_, and report_string_.
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inline |
References report_filter_name_.
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overridevirtual |
used to report filter internals through a score or silent file
Reimplemented from protocols::filters::Filter.
References checkpoint_read(), and filter_val().
Referenced by compute().
std::string protocols::simple_filters::ReportFilter::report_string | ( | ) | const |
References report_string_.
void protocols::simple_filters::ReportFilter::report_string | ( | std::string const & | s | ) |
References report_string_.
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private |
Referenced by checkpoint_read(), checkpoint_write(), and checkpointing_file().
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private |
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mutableprivate |
Referenced by apply(), checkpoint_read(), and filter_val().
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private |
Referenced by parse_my_tag(), report(), and report_filter_name().
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private |
Referenced by parse_my_tag(), report(), and report_string().