Rosetta  2021.16
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
protocols::abinitio::AbrelaxApplication Member List

This is the complete list of members for protocols::abinitio::AbrelaxApplication, including all inherited members.

abrelax_checkpoints_protocols::abinitio::AbrelaxApplicationprivate
AbrelaxApplication()protocols::abinitio::AbrelaxApplication
AbrelaxApplication(AbrelaxApplication const &)protocols::abinitio::AbrelaxApplication
add_constraints(core::pose::Pose &pose)protocols::abinitio::AbrelaxApplication
add_evaluation(evaluation::PoseEvaluatorOP)protocols::abinitio::AbrelaxApplication
bRelax_protocols::abinitio::AbrelaxApplicationprivate
check_filters(core::pose::Pose &pose)protocols::abinitio::AbrelaxApplication
close_loops(core::pose::Pose &pose, core::scoring::ScoreFunctionOP scorefxn, std::string const &tag)protocols::abinitio::AbrelaxApplication
copy_native_structure(core::pose::Pose &extended_pose) const protocols::abinitio::AbrelaxApplicationprivate
copy_structure(core::pose::Pose &extended_pose, core::pose::Pose &desired_pose) const protocols::abinitio::AbrelaxApplicationprivate
cstset_protocols::abinitio::AbrelaxApplicationprivate
do_distributed_rerun()protocols::abinitio::AbrelaxApplication
do_rerun()protocols::abinitio::AbrelaxApplication
evaluator_protocols::abinitio::AbrelaxApplicationprivate
fold(core::pose::Pose &extended_pose, ProtocolOP prot_ptr)protocols::abinitio::AbrelaxApplication
fragset_large_protocols::abinitio::AbrelaxApplicationprivate
fragset_small_protocols::abinitio::AbrelaxApplicationprivate
fragset_small_top25_protocols::abinitio::AbrelaxApplicationprivate
fragset_templates_protocols::abinitio::AbrelaxApplicationprivate
generate_extended_pose(core::pose::Pose &extended_pose, std::string const &sequence) const protocols::abinitio::AbrelaxApplicationprivate
generate_scorefxn(bool fullatom=false)protocols::abinitio::AbrelaxApplicationprivate
init_pose_obj_protocols::abinitio::AbrelaxApplicationprivate
initialize_constraint_forest(core::pose::Pose &pose)protocols::abinitio::AbrelaxApplicationprivate
insert_template_frags(core::pose::Pose &, core::kinematics::MoveMapOP movemap, std::string tag) const protocols::abinitio::AbrelaxApplicationprivate
jump_def_protocols::abinitio::AbrelaxApplicationprivate
loops_in_protocols::abinitio::AbrelaxApplicationprivate
membrane_jumps_protocols::abinitio::AbrelaxApplicationprivate
multi_fast_relax(Protocol &abinitio_protocol, core::scoring::ScoreFunctionOP, jobdist::PlainSilentFileJobDistributor jobdist, int &curr_nstruct, jobdist::BasicJobOP &curr_job)protocols::abinitio::AbrelaxApplication
native_pose_protocols::abinitio::AbrelaxApplicationprivate
pca_protocols::abinitio::AbrelaxApplicationprivate
process_decoy(core::pose::Pose &pose, core::scoring::ScoreFunction const &, std::string tag, core::io::silent::SilentStruct &) const protocols::abinitio::AbrelaxApplication
provide_citation_info(basic::citation_manager::CitationCollectionList &citation_list) const protocols::abinitio::AbrelaxApplication
register_options()protocols::abinitio::AbrelaxApplicationstatic
relax(core::pose::Pose &pose, core::scoring::ScoreFunctionOP, std::string const &tag)protocols::abinitio::AbrelaxApplication
run()protocols::abinitio::AbrelaxApplication
sequence_protocols::abinitio::AbrelaxApplicationprivate
set_use_trRosetta_constraints(bool const setting)protocols::abinitio::AbrelaxApplication
setup()protocols::abinitio::AbrelaxApplication
setup_fold(core::pose::Pose &extended_pose, ProtocolOP &prot_ptr)protocols::abinitio::AbrelaxApplication
setup_fragments()protocols::abinitio::AbrelaxApplicationprivate
setup_jumps(core::pose::Pose const &extended_pose)protocols::abinitio::AbrelaxApplicationprivate
setup_membrane_topology(core::pose::Pose &pose, std::string spanfile) const protocols::abinitio::AbrelaxApplicationprivate
setup_templates()protocols::abinitio::AbrelaxApplicationprivate
silent_options_protocols::abinitio::AbrelaxApplicationprivate
silent_score_file_protocols::abinitio::AbrelaxApplicationprivate
ss_def_protocols::abinitio::AbrelaxApplicationprivate
templates_protocols::abinitio::AbrelaxApplicationprivate
use_trRosetta_constraints_protocols::abinitio::AbrelaxApplicationprivate
~AbrelaxApplication()protocols::abinitio::AbrelaxApplicationvirtual