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protocols::features::helixAssembly::HelixBundleFeatures Member List

This is the complete list of members for protocols::features::helixAssembly::HelixBundleFeatures, including all inherited members.

check_relevant_residues(utility::vector1< bool > const &relevant_residues, core::Size res1) const protocols::features::FeaturesReporter
check_relevant_residues(utility::vector1< bool > const &relevant_residues, core::Size res1, core::Size res2) const protocols::features::FeaturesReporter
check_relevant_residues(utility::vector1< bool > const &relevant_residues, utility::vector1< core::Size > const &residues) const protocols::features::FeaturesReporter
check_relevant_residues_range(utility::vector1< bool > const &relevant_residues, core::Size res1, core::Size res2) const protocols::features::FeaturesReporter
class_name()protocols::features::helixAssembly::HelixBundleFeaturesstatic
delete_record(StructureID, utility::sql_database::sessionOP)protocols::features::FeaturesReporterinlinevirtual
delete_records_from_table(std::string const &table_name, StructureID struct_id, utility::sql_database::sessionOP db_session)protocols::features::FeaturesReporterprotected
features_reporter_dependencies() const overrideprotocols::features::helixAssembly::HelixBundleFeaturesvirtual
FeaturesReporter()protocols::features::FeaturesReporterinline
find_tag(core::pose::Pose const &pose) const protocols::features::FeaturesReporterprotected
get_helices(StructureID struct_id, utility::sql_database::sessionOP db_session)protocols::features::helixAssembly::HelixBundleFeatures
get_relevant_residues_mode() const protocols::features::FeaturesReporter
helix_cap_dist_cutoff_protocols::features::helixAssembly::HelixBundleFeaturesprivate
HelixBundleFeatures()protocols::features::helixAssembly::HelixBundleFeatures
load_into_pose(utility::sql_database::sessionOP, StructureID, core::pose::Pose &)protocols::features::FeaturesReporterinlinevirtual
min_helix_size_protocols::features::helixAssembly::HelixBundleFeaturesprivate
min_interacting_set_fraction_protocols::features::helixAssembly::HelixBundleFeaturesprivate
min_per_residue_fa_attr_protocols::features::helixAssembly::HelixBundleFeaturesprivate
num_helices_per_bundle_protocols::features::helixAssembly::HelixBundleFeaturesprivate
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &data) overrideprotocols::features::helixAssembly::HelixBundleFeaturesvirtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)protocols::features::helixAssembly::HelixBundleFeaturesstatic
relevant_residues_mode_protocols::features::FeaturesReporterprotected
report_features(core::pose::Pose const &pose, utility::vector1< bool > const &relevant_residues, StructureID struct_id, utility::sql_database::sessionOP db_session) overrideprotocols::features::helixAssembly::HelixBundleFeaturesvirtual
protocols::features::FeaturesReporter::report_features(core::pose::Pose const &, StructureID, utility::sql_database::sessionOP)protocols::features::FeaturesReporter
sasa_filter_protocols::features::helixAssembly::HelixBundleFeaturesprivate
schema() const protocols::features::FeaturesReporterinlinevirtual
scorefxn_protocols::features::helixAssembly::HelixBundleFeaturesprivate
set_relevant_residues_mode(RelevantResiduesMode::T setting)protocols::features::FeaturesReporter
type_name() const overrideprotocols::features::helixAssembly::HelixBundleFeaturesvirtual
validate_bundle(core::pose::Pose const &pose, utility::vector1< HelicalFragment > const &helices)protocols::features::helixAssembly::HelixBundleFeatures
write_bundle_to_db(protocols::features::StructureID const &struct_id, utility::sql_database::sessionOP db_session, utility::vector1< HelicalFragment > const &bundle)protocols::features::helixAssembly::HelixBundleFeatures
write_schema_to_db(utility::sql_database::sessionOP db_session) const overrideprotocols::features::helixAssembly::HelixBundleFeaturesvirtual
~FeaturesReporter() overrideprotocols::features::FeaturesReporter