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ConsensusLoopDesignOperation.hh File Reference

Restrict loop residue identities to those commonly found in nature. More...

#include <protocols/denovo_design/task_operations/ConsensusLoopDesignOperation.fwd.hh>
#include <core/conformation/Residue.fwd.hh>
#include <core/select/residue_selector/ResidueSelector.fwd.hh>
#include <core/pose/Pose.fwd.hh>
#include <core/scoring/packstat/compute_sasa.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/pack/task/operation/TaskOperation.hh>
#include <core/types.hh>
#include <basic/datacache/DataMap.fwd.hh>
#include <utility/SingletonBase.hh>
#include <utility/tag/Tag.fwd.hh>
#include <utility/tag/XMLSchemaGeneration.fwd.hh>

Classes

struct  protocols::denovo_design::task_operations::SurroundingSS
 
class  protocols::denovo_design::task_operations::AAFrequency
 
class  protocols::denovo_design::task_operations::AAFrequencies
 
class  protocols::denovo_design::task_operations::ConsensusLoopDatabase
 
struct  protocols::denovo_design::task_operations::LoopInfo
 
class  protocols::denovo_design::task_operations::ConsensusLoopDesignOperation
 

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::denovo_design
 
 protocols::denovo_design::task_operations
 

Typedefs

typedef
utility::pointer::shared_ptr
< AAFrequency const > 
protocols::denovo_design::task_operations::AAFrequencyOP
 
typedef
utility::pointer::shared_ptr
< AAFrequency const > 
protocols::denovo_design::task_operations::AAFrequencyCOP
 
typedef utility::vector1
< AAFrequencies > 
protocols::denovo_design::task_operations::LoopAAs
 
typedef utility::vector1
< LoopInfo > 
protocols::denovo_design::task_operations::LoopInfoVec
 

Functions

std::ostream & protocols::denovo_design::task_operations::operator<< (std::ostream &os, LoopInfo const &info)
 

Detailed Description

Restrict loop residue identities to those commonly found in nature.

Author
Tom Linsky (tlins.nosp@m.ky@u.nosp@m.w.edu)