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PsiPredInterface.hh File Reference
#include <core/pose/Pose.fwd.hh>
#include <core/types.hh>
#include <utility/VirtualBase.hh>
#include <map>
#include <string>

Classes

struct  core::io::external::PsiPredResult
 
class  core::io::external::PsiPredInterface
 

Namespaces

 core
 A class for reading in the atom type properties.
 
 core::io
 
 core::io::external
 

Typedefs

typedef std::map< std::string
const, PsiPredResult const > 
core::io::external::PsiPredResultMap
 

Functions

utility::vector1< core::Realcore::io::external::generate_prob (PsiPredResult const &psipred_result, std::string desired_ss)
 generates scores for each residue based on psipred confidence and the desired secondary structure More...
 
utility::vector1< core::Sizecore::io::external::nonmatching_residues (std::string const &blueprint_ss, std::string const &pred_ss)
 finds which positions in the blueprint and predicted secondary structure string don't match returns a vector of the residue numbers More...