Rosetta
protocols::match::output::PoseMatchOutputWriter Member List

This is the complete list of members for protocols::match::output::PoseMatchOutputWriter, including all inherited members.

assemble_outtag(utility::vector1< core::conformation::ResidueCOP > const &upstream_matchres)protocols::match::output::PDBWriterprotected
assemble_remark_lines(core::pose::Pose &outpose, utility::vector1< core::conformation::ResidueCOP > const &upstream_matchres, std::map< core::Size, core::Size > const &redundant_upstream_res, utility::vector1< core::Size > const &ex_geom_ids_for_upstream_res) constprotocols::match::output::PDBWriter
clear_match_data()protocols::match::output::CloudPDBWriterprotected
CloudPDBWriter(MatchGrouperOP grouper)protocols::match::output::CloudPDBWriter
coordinate_cacher()protocols::match::output::PDBWriterprotected
coordinate_cacher_protocols::match::output::PDBWriterprivate
create_output_upstream_pose(utility::vector1< core::conformation::ResidueCOP > const &upstream_matchres, std::map< core::Size, core::Size > const &redundant_upstream_res, utility::vector1< core::Size > const &ex_geom_ids_for_upstream_res)protocols::match::output::PDBWriter
cst_io() constprotocols::match::output::OutputWriter
cst_io_protocols::match::output::OutputWriterprivate
cstfile_name() constprotocols::match::output::PDBWriter
cstfile_name_protocols::match::output::PDBWriterprivate
determine_redundant_upstream_matchres(match_dspos1 const &m, std::map< core::Size, core::Size > &redundant_upstream_res) constprotocols::match::output::OutputWriter
downstream_pose_from_task_protocols::match::output::PDBWriterprivate
DownstreamHitSets typedefprotocols::match::output::CloudPDBWriter
ds_hitset_end_its() constprotocols::match::output::CloudPDBWriter
ds_hitset_end_its_protocols::match::output::CloudPDBWriterprivate
ds_hitset_its() constprotocols::match::output::CloudPDBWriter
ds_hitset_its_protocols::match::output::CloudPDBWriterprivate
dsbuilders()protocols::match::output::PDBWriterprotected
dsbuilders_protocols::match::output::PDBWriterprivate
end_output_writing() overrideprotocols::match::output::PoseMatchOutputWritervirtual
grouper_protocols::match::output::CloudPDBWriterprivate
initialize_from_matcher_task(MatcherTaskCOP mtask) overrideprotocols::match::output::PDBWritervirtual
insert_match_into_pose(core::pose::Pose &pose, core::Size match_group)protocols::match::output::PoseMatchOutputWriter
insert_match_into_pose(core::pose::Pose &pose)protocols::match::output::PoseMatchOutputWriter
match_groups_dshits() constprotocols::match::output::CloudPDBWriter
match_groups_dshits_protocols::match::output::CloudPDBWriterprivate
match_groups_ushits() constprotocols::match::output::CloudPDBWriter
match_groups_ushits_protocols::match::output::CloudPDBWriterprivate
num_geom_cst() constprotocols::match::output::PDBWriter
num_geom_cst_protocols::match::output::PDBWriterprivate
num_written_protocols::match::output::PDBWriterprivate
orig_upstream_pose_protocols::match::output::PDBWriterprivate
output_dsgeom_for_geomcst_protocols::match::output::PDBWriterprivate
OutputWriter()protocols::match::output::OutputWriter
Parent typedefprotocols::match::output::PDBWriter
parent typedefprotocols::match::output::PoseMatchOutputWriter
PDBWriter()protocols::match::output::PDBWriter
PoseMatchOutputWriter(MatchGrouperOP grouper)protocols::match::output::PoseMatchOutputWriter
prefix() constprotocols::match::output::PDBWriter
prefix_protocols::match::output::PDBWriterprivate
prepare_for_output_writing() overrideprotocols::match::output::CloudPDBWritervirtual
record_match(match const &m, MatchEvaluatorOP evaluator, MatchScoreWriterOP match_score_writer) overrideprotocols::match::output::CloudPDBWritervirtual
record_match(match_dspos1 const &m) overrideprotocols::match::output::CloudPDBWritervirtual
representative_group_matches() constprotocols::match::output::CloudPDBWriter
representative_group_matches_protocols::match::output::CloudPDBWriterprivate
scaf_name() constprotocols::match::output::PDBWriter
scaf_name_protocols::match::output::PDBWriterprivate
set_coordinate_cacher(UpstreamHitCacherOP)protocols::match::output::PDBWriter
set_downstream_builder(core::Size geomcst_id, downstream::DownstreamBuilderCOP dsbuilder)protocols::match::output::PDBWriter
set_prefix(std::string const &prefix)protocols::match::output::PDBWriter
setup_hitset_iterators_for_group(core::Size const group)protocols::match::output::CloudPDBWriterprotected
signature_map_protocols::match::output::PDBWriterprivate
signature_string(utility::vector1< core::conformation::ResidueCOP > const &upstream_matchres) constprotocols::match::output::PDBWriter
SizePair typedefprotocols::match::output::PDBWriter
unique_match_names_protocols::match::output::CloudPDBWriterprivate
upstream_only_geom_cst_protocols::match::output::PDBWriterprivate
UpstreamHitSets typedefprotocols::match::output::CloudPDBWriter
us_hitset_end_its_protocols::match::output::CloudPDBWriterprivate
us_hitset_its_protocols::match::output::CloudPDBWriterprivate
write_match_groups()protocols::match::output::CloudPDBWriter
write_matchres_only_protocols::match::output::PDBWriterprivate
~CloudPDBWriter() overrideprotocols::match::output::CloudPDBWriter
~OutputWriter() overrideprotocols::match::output::OutputWriter
~PDBWriter() overrideprotocols::match::output::PDBWriter
~PoseMatchOutputWriter() overrideprotocols::match::output::PoseMatchOutputWriter