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protocols::match::output::PoseMatchOutputWriter Member List

This is the complete list of members for protocols::match::output::PoseMatchOutputWriter, including all inherited members.

assemble_outtag(utility::vector1< core::conformation::ResidueCOP > const &upstream_matchres)protocols::match::output::PDBWriterprotected
assemble_remark_lines(core::pose::Pose &outpose, utility::vector1< core::conformation::ResidueCOP > const &upstream_matchres, std::map< core::Size, core::Size > const &redundant_upstream_res, utility::vector1< core::Size > const &ex_geom_ids_for_upstream_res) const protocols::match::output::PDBWriter
clear_match_data()protocols::match::output::CloudPDBWriterprotected
CloudPDBWriter(MatchGrouperOP grouper)protocols::match::output::CloudPDBWriter
coordinate_cacher()protocols::match::output::PDBWriterprotected
create_output_upstream_pose(utility::vector1< core::conformation::ResidueCOP > const &upstream_matchres, std::map< core::Size, core::Size > const &redundant_upstream_res, utility::vector1< core::Size > const &ex_geom_ids_for_upstream_res)protocols::match::output::PDBWriter
cst_io() const protocols::match::output::OutputWriter
cstfile_name() const protocols::match::output::PDBWriter
determine_redundant_upstream_matchres(match_dspos1 const &m, std::map< core::Size, core::Size > &redundant_upstream_res) const protocols::match::output::OutputWriter
DownstreamHitSets typedefprotocols::match::output::CloudPDBWriter
ds_hitset_end_its() const protocols::match::output::CloudPDBWriter
ds_hitset_its() const protocols::match::output::CloudPDBWriter
dsbuilders()protocols::match::output::PDBWriterprotected
end_output_writing() overrideprotocols::match::output::PoseMatchOutputWritervirtual
initialize_from_matcher_task(MatcherTaskCOP mtask) overrideprotocols::match::output::PDBWritervirtual
insert_match_into_pose(core::pose::Pose &pose, core::Size match_group)protocols::match::output::PoseMatchOutputWriter
insert_match_into_pose(core::pose::Pose &pose)protocols::match::output::PoseMatchOutputWriter
match_groups_dshits() const protocols::match::output::CloudPDBWriter
match_groups_ushits() const protocols::match::output::CloudPDBWriter
num_geom_cst() const protocols::match::output::PDBWriter
OutputWriter()protocols::match::output::OutputWriter
parent typedefprotocols::match::output::PoseMatchOutputWriter
Parent typedefprotocols::match::output::PDBWriter
PDBWriter()protocols::match::output::PDBWriter
PoseMatchOutputWriter(MatchGrouperOP grouper)protocols::match::output::PoseMatchOutputWriter
prefix() const protocols::match::output::PDBWriter
prepare_for_output_writing() overrideprotocols::match::output::CloudPDBWritervirtual
record_match(match const &m, MatchEvaluatorOP evaluator, MatchScoreWriterOP match_score_writer) overrideprotocols::match::output::CloudPDBWritervirtual
record_match(match_dspos1 const &m) overrideprotocols::match::output::CloudPDBWritervirtual
representative_group_matches() const protocols::match::output::CloudPDBWriter
scaf_name() const protocols::match::output::PDBWriter
set_coordinate_cacher(UpstreamHitCacherOP)protocols::match::output::PDBWriter
set_downstream_builder(core::Size geomcst_id, downstream::DownstreamBuilderCOP dsbuilder)protocols::match::output::PDBWriter
set_prefix(std::string const &prefix)protocols::match::output::PDBWriter
setup_hitset_iterators_for_group(core::Size const group)protocols::match::output::CloudPDBWriterprotected
signature_string(utility::vector1< core::conformation::ResidueCOP > const &upstream_matchres) const protocols::match::output::PDBWriter
SizePair typedefprotocols::match::output::PDBWriter
UpstreamHitSets typedefprotocols::match::output::CloudPDBWriter
write_match_groups()protocols::match::output::CloudPDBWriter
~CloudPDBWriter() overrideprotocols::match::output::CloudPDBWriter
~OutputWriter() overrideprotocols::match::output::OutputWriter
~PDBWriter() overrideprotocols::match::output::PDBWriter
~PoseMatchOutputWriter() overrideprotocols::match::output::PoseMatchOutputWriter