Rosetta  2021.16
 All Classes Namespaces Files Functions Variables Typedefs Enumerations Enumerator Friends Macros Pages
Classes | Functions
protocols::vip Namespace Reference

Classes

class  VIP_Mover
 
class  VIP_Report
 

Functions

static basic::Tracer TR ("VIP")
 
bool are_seqs_different (core::pose::Pose &p1, core::pose::Pose &p2)
 
std::string base_name (const std::string &str)
 
std::string get_out_tag (std::string const &fname)
 
core::Real output_packstat (core::pose::Pose &pose)
 
void set_local_movemap (core::pose::Pose &pose, core::Size position, core::kinematics::MoveMapOP mmap)
 

Function Documentation

bool protocols::vip::are_seqs_different ( core::pose::Pose p1,
core::pose::Pose p2 
)
std::string protocols::vip::base_name ( const std::string &  str)

References core::sequence::end.

Referenced by core::pack::palette::PackerPalette::add_base_residue_types_by_properties(), protocols::jd2::JobOutputter::affixed_numbered_name(), core::io::pose_to_sfr::PoseToStructFileRepConverter::append_residue_info_to_sfr(), protocols::simple_moves::hbs::HbsPatcher::apply(), protocols::simple_moves::a3b_hbs::A3BHbsPatcher::apply(), protocols::hybridization::CartesianSampler::apply(), protocols::ligand_docking::StartFrom::apply(), protocols::electron_density::DockIntoDensityMover::apply_multi(), core::io::pdb::create_records_from_sfr(), protocols::ligand_docking::HighResDocker::enable_ligand_rotamer_packing(), protocols::ligand_docking::ProtLigEnsemble::enable_ligand_rotamer_packing(), protocols::jd3::pose_outputters::SilentFilePoseOutputter::filename_for_output_job(), core::chemical::ResidueTypeFinder::filter_by_residue_type_base_name(), protocols::residue_optimization::MetapatchEnumeration::generate_derived_types(), protocols::simple_moves::chiral::get_chiral_residue_type(), get_out_tag(), core::chemical::ResidueTypeSet::get_residue_type_with_custom_variant_added(), core::chemical::ResidueTypeSet::get_residue_type_with_variant_added(), core::chemical::ResidueTypeSet::get_residue_type_with_variant_removed(), core::pack::task::PIKAA::initialize_from_tokens(), core::pack::task::NOTAA::initialize_from_tokens(), protocols::ligand_docking::ProtLigEnsemble::make_packer_task(), protocols::ligand_docking::HighResDocker::make_packer_task_from_vector(), core::io::pose_from_sfr::PoseFromSFRBuilder::pass_2_resolve_residue_types(), core::io::NomenclatureManager::pdb_code_from_rosetta_name(), core::chemical::residue_type_base_name(), core::io::NomenclatureManager::rosetta_names_from_pdb_code(), protocols::analysis::InterfaceAnalyzerMover::scorefile_column_name(), core::pose::Pose::virtual_to_real(), and core::chemical::write_topology_file().

std::string protocols::vip::get_out_tag ( std::string const &  fname)

References base_name().

core::Real protocols::vip::output_packstat ( core::pose::Pose pose)
void protocols::vip::set_local_movemap ( core::pose::Pose pose,
core::Size  position,
core::kinematics::MoveMapOP  mmap 
)
static basic::Tracer protocols::vip::TR ( "VIP"  )
static