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BundleGridSampler.cc File Reference

This mover samples conformations of a helical bundle by performing a grid search in Crick parameter space. More...

#include <protocols/moves/Mover.fwd.hh>
#include <protocols/moves/Mover.hh>
#include <protocols/moves/MoverStatus.hh>
#include <protocols/helical_bundle/BundleGridSampler.hh>
#include <protocols/helical_bundle/BundleGridSamplerCreator.hh>
#include <protocols/helical_bundle/BundleGridSamplerHelper.hh>
#include <protocols/helical_bundle/MakeBundleHelix.hh>
#include <protocols/helical_bundle/MakeBundle.hh>
#include <core/optimization/Minimizer.hh>
#include <core/optimization/MinimizerOptions.hh>
#include <utility/tag/Tag.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <core/scoring/Energies.hh>
#include <numeric/constants.hh>
#include <utility/exit.hh>
#include <utility/string_util.hh>
#include <basic/Tracer.hh>
#include <core/types.hh>
#include <numeric/random/random.hh>
#include <core/id/TorsionID.hh>
#include <core/id/AtomID.hh>
#include <core/id/AtomID_Map.hh>
#include <core/id/NamedAtomID.hh>
#include <core/conformation/parametric/Parameter.hh>
#include <core/conformation/parametric/RealValuedParameter.hh>
#include <core/scoring/rms_util.hh>
#include <core/pose/util.tmpl.hh>
#include <protocols/helical_bundle/util.hh>
#include <utility/pointer/memory.hh>
#include <basic/citation_manager/UnpublishedModuleInfo.hh>
#include <basic/citation_manager/CitationCollection.hh>
#include <basic/citation_manager/CitationManager.hh>
#include <protocols/jd2/util.hh>
#include <utility/excn/Exceptions.hh>
#include <core/pose/Pose.hh>
#include <cmath>
#include <cstdio>
#include <sstream>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::helical_bundle
 

Functions

static basic::Tracer protocols::helical_bundle::TR ("protocols.helical_bundle.BundleGridSampler")
 
std::string protocols::helical_bundle::subtag_for_bundgrid (std::string const &subtag)
 

Detailed Description

This mover samples conformations of a helical bundle by performing a grid search in Crick parameter space.

This mover calls the MakeBundle mover (which in turn calls the MakeBundleHelix mover).

Author
Vikram K. Mulligan (vmull.nosp@m.ig@u.nosp@m.w.edu)