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JacobiLoopClosureMover.cc File Reference

Loop closure mover that uses linearization of the kinematics to adjust all unlocked backbone torsion angles of a loop at the same time. More...

#include <protocols/loops/loop_closure/jacobi/JacobiLoopClosureMover.hh>
#include <protocols/loops/loop_closure/jacobi/JacobiLoopClosureMoverCreator.hh>
#include <core/chemical/ResidueConnection.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/jacobian/JacobianStructure.hh>
#include <core/kinematics/jacobian/SeriesJacobians.hh>
#include <core/kinematics/jacobian/ModuleType1.hh>
#include <core/kinematics/AtomTree.hh>
#include <core/kinematics/FoldTree.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/pose/Pose.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/loops_main.hh>
#include <numeric/wrap_angles.hh>
#include <numeric/MathMatrix_operations.hh>
#include <numeric/MathVector_operations.hh>
#include <basic/Tracer.hh>
#include <utility/tag/Tag.hh>
#include <utility/pointer/memory.hh>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>
#include <protocols/loop_modeling/utilities/rosetta_scripts.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::loops
 
 protocols::loops::loop_closure
 
 protocols::loops::loop_closure::jacobi
 

Functions

static basic::Tracer TR ("protocols.loops.loop_closure.jacobi.JacobiLoopClosureMover")
 
std::ostream & protocols::loops::loop_closure::jacobi::operator<< (std::ostream &os, JacobiLoopClosureMover const &mover)
 private methods /// More...
 

Detailed Description

Loop closure mover that uses linearization of the kinematics to adjust all unlocked backbone torsion angles of a loop at the same time.

Author
teunhoevenaars (teunh.nosp@m.oeve.nosp@m.naars.nosp@m.@gma.nosp@m.il.co.nosp@m.m)

Function Documentation

static basic::Tracer TR ( "protocols.loops.loop_closure.jacobi.JacobiLoopClosureMover"  )
static