Rosetta
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#include <ConstraintScoreCutoffFilter.hh>
Public Types | |
typedef protocols::filters::Filter | parent |
Public Member Functions | |
ConstraintScoreCutoffFilter () | |
c-tor and More... | |
ConstraintScoreCutoffFilter (core::Real cutoff_in) | |
filters::FilterOP | clone () const override |
filters::FilterOP | fresh_instance () const override |
void | report (std::ostream &ostr, core::pose::Pose const &pose) const override |
void | parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override |
Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing. More... | |
bool | apply (core::pose::Pose const &pose) const override |
Returns true if the given pose passes the filter, false otherwise. In this case, the test is the result of the following comparison: sc <= cutoff Where cutoff is the cutoff set for this filter, and sc is the value of the ScoreType from the Pose Energies object. More... | |
void | set_cutoff (core::Real cutoff_in) |
void | set_cutoff (core::pose::Pose const &pose) |
core::Real | cutoff () const |
void | set_constraints (core::scoring::constraints::ConstraintCOPs cst_in) |
void | set_score_type (core::scoring::ScoreType scotype) |
virtual core::Real | get_score (core::pose::Pose const &pose) const |
core::Real | get_score (core::pose::Pose const &pose_in, core::scoring::constraints::ConstraintCOPs csts) const |
std::string | name () const override |
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Filter () | |
Filter (std::string const &) | |
~Filter () override | |
virtual core::Real | report_sm (core::pose::Pose const &) const |
used to report filter internals through a score or silent file More... | |
virtual std::string | get_type () const |
std::string | get_user_defined_name () const |
void | set_user_defined_name (std::string const &name) |
virtual void | clear () |
used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More... | |
virtual core::Real | score (core::pose::Pose &pose) |
virtual void | provide_citation_info (basic::citation_manager::CitationCollectionList &) const |
Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More... | |
Private Attributes | |
core::scoring::ScoreType | score_type_ |
core::Real | cutoff_ |
core::scoring::constraints::ConstraintCOPs | constraints_ |
Additional Inherited Members | |
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std::string | scorename_ |
typedef protocols::filters::Filter protocols::constraint_filters::ConstraintScoreCutoffFilter::parent |
protocols::constraint_filters::ConstraintScoreCutoffFilter::ConstraintScoreCutoffFilter | ( | ) |
c-tor and
protocols::constraint_filters::ConstraintScoreCutoffFilter::ConstraintScoreCutoffFilter | ( | core::Real | cutoff_in | ) |
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overridevirtual |
Returns true if the given pose passes the filter, false otherwise. In this case, the test is the result of the following comparison: sc <= cutoff Where cutoff is the cutoff set for this filter, and sc is the value of the ScoreType from the Pose Energies object.
Implements protocols::filters::Filter.
References protocols::jd2::add_string_real_pair_to_current_job(), cutoff(), get_score(), protocols::filters::Filter::get_user_defined_name(), and protocols::jd2::jd2_used().
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inlineoverridevirtual |
Implements protocols::filters::Filter.
Reimplemented in protocols::protein_interface_design::filters::StubScoreLoopsFilter.
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inline |
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inlineoverridevirtual |
Implements protocols::filters::Filter.
Reimplemented in protocols::protein_interface_design::filters::StubScoreLoopsFilter.
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virtual |
Reimplemented in protocols::protein_interface_design::filters::StubScoreLoopsFilter.
References constraints_.
Referenced by apply(), and set_cutoff().
core::Real protocols::constraint_filters::ConstraintScoreCutoffFilter::get_score | ( | core::pose::Pose const & | pose_in, |
core::scoring::constraints::ConstraintCOPs | csts | ||
) | const |
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inlineoverridevirtual |
Reimplemented from protocols::filters::Filter.
Reimplemented in protocols::protein_interface_design::filters::StubScoreLoopsFilter.
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overridevirtual |
Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing.
Reimplemented from protocols::filters::Filter.
Reimplemented in protocols::protein_interface_design::filters::StubScoreLoopsFilter.
References cutoff_, and protocols::filters::Filter::set_user_defined_name().
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overridevirtual |
Reimplemented from protocols::filters::Filter.
void protocols::constraint_filters::ConstraintScoreCutoffFilter::set_constraints | ( | core::scoring::constraints::ConstraintCOPs | cst_in | ) |
References constraints_.
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inline |
References cutoff_, and get_score().
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inline |
References cutoff_.
void protocols::constraint_filters::ConstraintScoreCutoffFilter::set_score_type | ( | core::scoring::ScoreType | scotype | ) |
References score_type_.
Referenced by protocols::protein_interface_design::filters::StubScoreLoopsFilter::StubScoreLoopsFilter().
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private |
Referenced by get_score(), and set_constraints().
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private |
Referenced by cutoff(), parse_my_tag(), and set_cutoff().
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private |
Referenced by get_score(), and set_score_type().