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protocols::topology_broker::DisulfJumpClaimer Member List

This is the complete list of members for protocols::topology_broker::DisulfJumpClaimer, including all inherited members.

_static_type_name()protocols::topology_broker::DisulfJumpClaimerinlinestatic
accept_declined_claim(claims::DofClaim const &was_declined) overrideprotocols::topology_broker::FragmentClaimervirtual
add_constraints(core::pose::Pose &) const protocols::topology_broker::TopologyClaimerinlinevirtual
add_mover(moves::RandomMover &, core::pose::Pose const &, abinitio::StageID, core::scoring::ScoreFunction const &, core::Real)protocols::topology_broker::TopologyClaimervirtual
adjust_relax_movemap(core::kinematics::MoveMap &) const protocols::topology_broker::TopologyClaimerinlinevirtual
all_frames_protocols::topology_broker::DisulfJumpClaimerprivate
all_jump_pairings_protocols::topology_broker::DisulfJumpClaimerprivate
allow_claim(claims::DofClaim const &)protocols::topology_broker::TopologyClaimerinlinevirtual
bKeepJumpsFromInputPose_protocols::topology_broker::DisulfJumpClaimerprivate
broker() const protocols::topology_broker::TopologyClaimerinline
build_fold_tree(core::pose::Pose &, core::kinematics::FoldTree &)protocols::topology_broker::TopologyClaimerinlinevirtual
claim_accepted(claims::DofClaimOP my_claim)protocols::topology_broker::TopologyClaimerinlinevirtual
claimer_builds_own_fold_tree()protocols::topology_broker::TopologyClaimerinlinevirtual
clone() const overrideprotocols::topology_broker::DisulfJumpClaimervirtual
DisulfJumpClaimer()protocols::topology_broker::DisulfJumpClaimer
finalize_claims(claims::DofClaims &)protocols::topology_broker::TopologyClaimerinlinevirtual
FragmentClaimer()protocols::topology_broker::FragmentClaimer
FragmentClaimer(simple_moves::FragmentMoverOP, std::string const &mover_tag, weights::AbinitioMoverWeightOP weight)protocols::topology_broker::FragmentClaimer
FragmentClaimer(simple_moves::FragmentMoverOP, std::string const &mover_tag, weights::AbinitioMoverWeightOP weight, std::string label, core::fragment::FragSetOP fags)protocols::topology_broker::FragmentClaimer
FragmentClaimer(simple_moves::FragmentMoverOP)protocols::topology_broker::FragmentClaimer
FragmentClaimer(FragmentClaimer const &src)protocols::topology_broker::FragmentClaimer
fragments()protocols::topology_broker::FragmentClaimerprotected
generate_claims(claims::DofClaims &) overrideprotocols::topology_broker::DisulfJumpClaimervirtual
generate_jump_frags(protocols::jumping::DisulfPairingLibrary const &lib, core::fragment::FrameList &all_frames) const protocols::topology_broker::DisulfJumpClaimer
generate_sequence_claims(claims::DofClaims &)protocols::topology_broker::TopologyClaimerinlinevirtual
generate_symmetry_claims(claims::SymmetryClaims &)protocols::topology_broker::TopologyClaimerinlinevirtual
get_fold_tree(core::pose::Pose &)protocols::topology_broker::TopologyClaimerinlinevirtual
get_frag_mover_ptr()protocols::topology_broker::FragmentClaimerprotected
get_mover(core::pose::Pose const &) const overrideprotocols::topology_broker::FragmentClaimervirtual
get_pose_from_claimer()protocols::topology_broker::TopologyClaimerinlinevirtual
get_self_ptr() const protocols::topology_broker::TopologyClaimerinline
get_self_ptr()protocols::topology_broker::TopologyClaimerinline
get_self_weak_ptr() const protocols::topology_broker::TopologyClaimerinline
get_self_weak_ptr()protocols::topology_broker::TopologyClaimerinline
get_sequence_region(std::set< core::Size > &start_region) const protocols::topology_broker::FragmentClaimer
init_after_reading() overrideprotocols::topology_broker::FragmentClaimerprotectedvirtual
initialize_dofs(core::pose::Pose &, claims::DofClaims const &init_claims, claims::DofClaims &failed_to_init) overrideprotocols::topology_broker::DisulfJumpClaimervirtual
label() const protocols::topology_broker::TopologyClaimerinline
local_disulf_data_protocols::topology_broker::DisulfJumpClaimerprivate
loop_frags(core::kinematics::MoveMap &) const protocols::topology_broker::TopologyClaimerinlinevirtual
manipulate_cut_bias(utility::vector1< core::Real > &)protocols::topology_broker::TopologyClaimerinlinevirtual
movemap_protocols::topology_broker::FragmentClaimerprotected
mover() const protocols::topology_broker::FragmentClaimerinlineprotected
mover_tag() const protocols::topology_broker::FragmentClaimerinline
mover_weight()protocols::topology_broker::TopologyClaimerinline
new_decoy(core::pose::Pose const &) overrideprotocols::topology_broker::DisulfJumpClaimervirtual
new_decoy() overrideprotocols::topology_broker::DisulfJumpClaimervirtual
Parent typedefprotocols::topology_broker::DisulfJumpClaimerprivate
passes_filter(core::pose::Pose const &, abinitio::StageID, core::Real, std::ostringstream &)protocols::topology_broker::TopologyClaimerinlinevirtual
pre_process(core::pose::Pose &)protocols::topology_broker::TopologyClaimerinlinevirtual
read(std::istream &)protocols::topology_broker::TopologyClaimervirtual
read_mover_weight(std::istream &is)protocols::topology_broker::TopologyClaimer
read_tag(std::string tag, std::istream &is) overrideprotocols::topology_broker::DisulfJumpClaimervirtual
receive_message(ClaimerMessage &)protocols::topology_broker::TopologyClaimerinlinevirtual
set_bInitDofs(bool set)protocols::topology_broker::FragmentClaimerinline
set_broker(TopologyBrokerCAP ptr)protocols::topology_broker::TopologyClaimerinline
set_claim_right(claims::DofClaim::ClaimRight setting)protocols::topology_broker::FragmentClaimerinlineprotected
set_defaults()protocols::topology_broker::TopologyClaimerprotectedvirtual
set_fragments(core::fragment::FragSetOP)protocols::topology_broker::FragmentClaimerprotected
set_label(std::string const &str)protocols::topology_broker::TopologyClaimerinline
set_mover(simple_moves::FragmentMoverOP mover)protocols::topology_broker::FragmentClaimer
set_mover_tag(std::string const &str)protocols::topology_broker::FragmentClaimer
set_mover_weight(weights::AbinitioMoverWeightOP wset)protocols::topology_broker::TopologyClaimerinline
set_pose_from_broker(core::pose::Pose &)protocols::topology_broker::TopologyClaimerinlinevirtual
shared_from_this()protocols::topology_broker::FragmentClaimerinline
switch_to_fullatom(core::pose::Pose &, utility::vector1< bool >) const protocols::topology_broker::TopologyClaimerinlinevirtual
TopologyClaimer()protocols::topology_broker::TopologyClaimerinline
TopologyClaimer(weights::AbinitioMoverWeightOP weight)protocols::topology_broker::TopologyClaimerinline
type() const overrideprotocols::topology_broker::DisulfJumpClaimerinlinevirtual
~DisulfJumpClaimer() overrideprotocols::topology_broker::DisulfJumpClaimer
~FragmentClaimer() overrideprotocols::topology_broker::FragmentClaimer
~TopologyClaimer() override=defaultprotocols::topology_broker::TopologyClaimer