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core::fragment::DownJumpSRFD Member List

This is the complete list of members for core::fragment::DownJumpSRFD, including all inherited members.

_static_type_name()core::fragment::DownJumpSRFDinlinestatic
apply(pose::Pose &, Size const intra_frame_pos, Frame const &) const overridecore::fragment::DownJumpSRFDvirtual
apply(kinematics::MoveMap const &, pose::Pose &, Size const intra_frame_pos, Frame const &) const overridecore::fragment::DownJumpSRFDvirtual
apply(pose::Pose &, Size) const overridecore::fragment::DownJumpSRFDinlinevirtual
apply(kinematics::MoveMap const &, pose::Pose &, Size const ) const overridecore::fragment::DownJumpSRFDvirtual
apply_ss(std::string &, Size, Frame const &) const overridecore::fragment::DownJumpSRFDinlinevirtual
apply_ss(std::string &, Size) const overridecore::fragment::DownJumpSRFDinlinevirtual
AtomList typedefcore::fragment::DownJumpSRFD
clone() const overridecore::fragment::DownJumpSRFDinlinevirtual
create() const overridecore::fragment::DownJumpSRFDinlinevirtual
DownJumpSRFD(char sequence= 'X')core::fragment::DownJumpSRFDinline
DownJumpSRFD(kinematics::RT rt, AtomList downstream_stub_atoms, AtomList upstream_stub_atoms, char sequence)core::fragment::DownJumpSRFDinline
downstream_stub_atoms_core::fragment::DownJumpSRFDprivate
is_applicable(kinematics::MoveMap const &, Size pos, Frame const &) const overridecore::fragment::DownJumpSRFDvirtual
is_applicable(kinematics::MoveMap const &, Size) const overridecore::fragment::DownJumpSRFDinlinevirtual
is_compatible(SingleResidueFragData const &) const overridecore::fragment::DownJumpSRFDvirtual
Parent typedefcore::fragment::DownJumpSRFDprivate
read(std::istream &in)core::fragment::DownJumpSRFDvirtual
read_data(std::istream &)core::fragment::SingleResidueFragDatavirtual
rt_core::fragment::DownJumpSRFDprivate
secstruct() const core::fragment::SingleResidueFragDatainlinevirtual
sequence() const core::fragment::SingleResidueFragDatainline
sequence_core::fragment::SingleResidueFragDataprotected
set_jump(kinematics::RT setting)core::fragment::DownJumpSRFDinline
set_sequence(char const sequence)core::fragment::SingleResidueFragDatainline
set_standard_stub_atoms()core::fragment::DownJumpSRFD
set_stub_atoms(AtomList downstream, AtomList upstream)core::fragment::DownJumpSRFD
show(std::ostream &out) const overridecore::fragment::DownJumpSRFDvirtual
SingleResidueFragData(char sequence)core::fragment::SingleResidueFragDatainline
SingleResidueFragData()core::fragment::SingleResidueFragDatainline
steal(pose::Pose const &, Size pos, Frame const &) overridecore::fragment::DownJumpSRFDvirtual
steal(pose::Pose const &, Size) overridecore::fragment::DownJumpSRFDinlinevirtual
type() const overridecore::fragment::DownJumpSRFDinlinevirtual
upstream_stub_atoms_core::fragment::DownJumpSRFDprivate
~SingleResidueFragData() overridecore::fragment::SingleResidueFragData