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protocols::cryst Namespace Reference

Classes

struct  CheshireCell
 A struct used by spacegroup.cc and its helper functions. More...
 
class  CrystRMS
 
class  CrystRMSCreator
 
class  DockLatticeMover
 
class  DockLatticeMoverCreator
 
class  FitBfactorsMover
 
class  FitBfactorsMoverCreator
 
class  LoadDensityMapMover
 This class loads a density map into global data. Each apply will regenerate this data and force a reload of the data by default. More...
 
class  LoadDensityMapMoverCreator
 
class  MakeLatticeMover
 
class  MakeLatticeMoverCreator
 
class  MakeLayerMover
 
class  MakeLayerMoverCreator
 
class  RecomputeDensityMapMover
 
class  RecomputeDensityMapMoverCreator
 
class  ReportGradientsMover
 
class  ReportGradientsMoverCreator
 
class  SetCrystWeightMover
 
class  SetCrystWeightMoverCreator
 
class  SetRefinementOptionsMover
 
class  SetRefinementOptionsMoverCreator
 
class  Spacegroup
 
class  TagPoseWithRefinementStatsMover
 
class  TagPoseWithRefinementStatsMoverCreator
 
class  UpdateCrystInfo
 
class  UpdateCrystInfoCreator
 
class  UpdateSolventMover
 
class  UpdateSolventMoverCreator
 
class  WallpaperGroup
 

Enumerations

enum  SpacegroupSetting {
  TRICLINIC, MONOCLINIC, ORTHORHOMBIC, TETRAGONAL,
  HEXAGONAL, CUBIC, NOSETTING
}
 
enum  WallpaperGroupSetting {
  wgMONOCLINIC, wgTETRAGONAL, wgHEXAGONAL, wgCUBIC,
  wgNOSETTING
}
 

Functions

static basic::Tracer TR ("protocols.cryst.cryst_movers")
 
std::string SetCrystWeightMover_subelement_ct_name (std::string const &name)
 
void get_corresponding_CAs (core::pose::Pose const &model, core::pose::Pose const &native, core::sequence::SequenceAlignment const &aln, ObjexxFCL::FArray2D< core::Real > &p1a, ObjexxFCL::FArray2D< core::Real > &p2a)
 
core::Size get_nres_asu (core::pose::Pose const &pose)
 
core::Real crystRMSfast (core::pose::Pose &pose_native, core::pose::Pose &pose_decoy)
 
core::Real crystRMS (core::pose::Pose &pose_native, core::pose::Pose &pose_decoy, bool allatom, int native_cdist, int decoy_cdist)
 
static basic::Tracer TR ("protocols.cryst.refinable_lattice")
 
core::Real getMW (core::pose::Pose const &pose)
 
core::Real getVolume (core::Real A, core::Real B, core::Real C, core::Real alpha, core::Real beta, core::Real gamma)
 
static basic::Tracer TSG ("spacegroup")
 
core::Real absfpart (core::Real x)
 
core::Size denom (core::Real x)
 
void get_symmops_P1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P1211 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_C121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P1m1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P1c1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_C1m1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_C1c1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P12slashm1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P121slashm1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_C12slashm1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P12slashc1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P121slashc1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P121slashn1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_C12slashc1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P2221 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P21212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P212121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_C2221 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_C222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_F222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I212121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmc21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pcc2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pma2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pca21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnc2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmn21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pba2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pna21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnn2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Cmm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Cmc21 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Ccc2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Amm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Abm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Ama2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Aba2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fmm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fdd2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Imm2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iba2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Ima2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnnn__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pccm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pban__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmma (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnna (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmna (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pcca (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pbam (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pccn (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pbcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnnm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmmn__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pbcn (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pbca (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnma (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Cmcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Cmca (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Cmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Cccm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Cmma (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Ccca__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fddd__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Immm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Ibam (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Ibca (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Imma (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P41 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P43 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I4 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I41 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus4 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iminus4 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashn__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashn__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I4slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I41slasha__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P422 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4122 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P41212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4322 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P43212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I422 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I4122 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4mm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4bm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42cm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42nm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4cc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4nc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42mc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42bc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I4mm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I4cm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I41md (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I41cd (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus42m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus42c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus421m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus421c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus4m2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus4c2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus4b2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus4n2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iminus4m2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iminus4c2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iminus42m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iminus42d (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashmcc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashnbm__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashnnc__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashmbm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashmnc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashnmm__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4slashncc__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashmmc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashmcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashnbc__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashnnm__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashmbc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashmnm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashnmc__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P42slashncm__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I4slashmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I4slashmcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I41slashamd__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I41slashacd__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P31 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P32 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_R3__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Rminus3__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P312 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P321 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P3112 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P3121 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P3212 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P3221 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_R32__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P3m1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P31m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P3c1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P31c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_R3m__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_R3c__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus31m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus31c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus3m1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus3c1 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Rminus3m__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Rminus3c__H (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P61 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P65 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P62 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P64 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P63 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus6 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P63slashm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P622 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6122 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6522 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6222 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6422 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6322 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6mm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6cc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P63cm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P63mc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus6m2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus6c2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus62m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus62c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6slashmmm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P6slashmcc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P63slashmcm (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P63slashmmc (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P23 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_F23 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I23 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P213 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I213 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnminus3__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fmminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fdminus3__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Imminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Paminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iaminus3 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P432 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4232 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_F432 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_F4132 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I432 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4332 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_P4132 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_I4132 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus43m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fminus43m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iminus43m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pminus43n (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fminus43c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iminus43d (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmminus3m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnminus3n__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pmminus3n (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Pnminus3m__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fmminus3m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fmminus3c (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fdminus3m__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Fdminus3c__2 (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Imminus3m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_Iaminus3d (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
void get_symmops_B11m (utility::vector1< core::kinematics::RT > &rt_out, CheshireCell &cc)
 
static basic::Tracer TR ("protocols.cryst.refinable_lattice")
 
int pos_mod (int x, int y)
 
core::Real pos_mod (core::Real x, core::Real y)
 
int min_mod (int x, int y)
 
core::Real min_mod (core::Real x, core::Real y)
 
static basic::Tracer TSW ("WallpaperGroup")
 

Enumeration Type Documentation

Enumerator
TRICLINIC 
MONOCLINIC 
ORTHORHOMBIC 
TETRAGONAL 
HEXAGONAL 
CUBIC 
NOSETTING 
Enumerator
wgMONOCLINIC 
wgTETRAGONAL 
wgHEXAGONAL 
wgCUBIC 
wgNOSETTING 

Function Documentation

core::Real protocols::cryst::absfpart ( core::Real  x)
inline

Referenced by denom().

core::Real protocols::cryst::crystRMS ( core::pose::Pose pose_native,
core::pose::Pose pose_decoy,
bool  allatom,
int  native_cdist,
int  decoy_cdist 
)
core::Real protocols::cryst::crystRMSfast ( core::pose::Pose pose_native,
core::pose::Pose pose_decoy 
)
core::Size protocols::cryst::denom ( core::Real  x)
inline
void protocols::cryst::get_corresponding_CAs ( core::pose::Pose const &  model,
core::pose::Pose const &  native,
core::sequence::SequenceAlignment const &  aln,
ObjexxFCL::FArray2D< core::Real > &  p1a,
ObjexxFCL::FArray2D< core::Real > &  p2a 
)
core::Size protocols::cryst::get_nres_asu ( core::pose::Pose const &  pose)
void protocols::cryst::get_symmops_Aba2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Abm2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Ama2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Amm2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_B11m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_C121 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_C12slashc1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_C12slashm1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_C1c1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_C1m1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_C222 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_C2221 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Ccc2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Ccca__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Cccm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Cmc21 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Cmca ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Cmcm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Cmm2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Cmma ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Cmmm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_F222 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_F23 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_F4132 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_F432 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fdd2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fddd__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fdminus3__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fdminus3c__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fdminus3m__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fminus43c ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fminus43m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fmm2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fmminus3 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fmminus3c ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fmminus3m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Fmmm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I212121 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I213 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I222 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I23 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I4 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I41 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I4122 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I4132 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I41cd ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I41md ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I41slasha__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I41slashacd__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I41slashamd__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I422 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I432 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I4cm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I4mm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I4slashm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I4slashmcm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_I4slashmmm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iaminus3 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iaminus3d ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iba2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Ibam ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Ibca ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Ima2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iminus4 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iminus42d ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iminus42m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iminus43d ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iminus43m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iminus4c2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Iminus4m2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Imm2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Imma ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Imminus3 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Imminus3m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Immm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P121 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P1211 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P121slashc1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P121slashm1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P121slashn1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P12slashc1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P12slashm1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P1c1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P1m1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P21212 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P212121 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P213 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P222 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P2221 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P23 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P3 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P31 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P3112 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P312 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P3121 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P31c ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P31m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P32 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P321 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P3212 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P3221 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P3c1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P3m1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P41 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P41212 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4122 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4132 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4212 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P422 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42212 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4222 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4232 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42bc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42cm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42mc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42nm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashmbc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashmcm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashmmc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashmnm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashn__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashnbc__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashncm__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashnmc__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P42slashnnm__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P43 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P432 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P43212 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4322 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4332 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4bm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4cc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4mm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4nc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashmbm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashmcc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashmmm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashmnc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashn__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashnbm__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashncc__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashnmm__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P4slashnnc__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P61 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6122 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P62 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P622 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6222 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P63 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6322 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P63cm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P63mc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P63slashm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P63slashmcm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P63slashmmc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P64 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6422 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P65 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6522 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6cc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6mm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6slashm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6slashmcc ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_P6slashmmm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Paminus3 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pba2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pbam ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pban__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pbca ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pbcm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pbcn ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pca21 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pcc2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pcca ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pccm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pccn ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pma2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmc21 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus3 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus31c ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus31m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus3c1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus3m1 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus4 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus421c ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus421m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus42c ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus42m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus43m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus43n ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus4b2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus4c2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus4m2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus4n2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus6 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus62c ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus62m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus6c2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pminus6m2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmm2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmma ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmminus3 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmminus3m ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmminus3n ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmmm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmmn__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmn21 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pmna ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pna21 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnc2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnma ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnminus3__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnminus3m__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnminus3n__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnn2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnna ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnnm ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Pnnn__2 ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_R32__H ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_R3__H ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_R3c__H ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_R3m__H ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Rminus3__H ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Rminus3c__H ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
void protocols::cryst::get_symmops_Rminus3m__H ( utility::vector1< core::kinematics::RT > &  rt_out,
CheshireCell &  cc 
)
core::Real protocols::cryst::getMW ( core::pose::Pose const &  pose)
core::Real protocols::cryst::getVolume ( core::Real  A,
core::Real  B,
core::Real  C,
core::Real  alpha,
core::Real  beta,
core::Real  gamma 
)
int protocols::cryst::min_mod ( int  x,
int  y 
)
inline
core::Real protocols::cryst::min_mod ( core::Real  x,
core::Real  y 
)
inline
int protocols::cryst::pos_mod ( int  x,
int  y 
)
inline
core::Real protocols::cryst::pos_mod ( core::Real  x,
core::Real  y 
)
inline
std::string protocols::cryst::SetCrystWeightMover_subelement_ct_name ( std::string const &  name)
static basic::Tracer protocols::cryst::TR ( "protocols.cryst.cryst_movers"  )
static
static basic::Tracer protocols::cryst::TR ( "protocols.cryst.refinable_lattice"  )
static
static basic::Tracer protocols::cryst::TR ( "protocols.cryst.refinable_lattice"  )
static
static basic::Tracer protocols::cryst::TSG ( "spacegroup"  )
static
static basic::Tracer protocols::cryst::TSW ( "WallpaperGroup"  )
static