Rosetta
core::io::external::PsiPredInterface Member List

This is the complete list of members for core::io::external::PsiPredInterface, including all inherited members.

cleanup_after_psipred(std::string const &psipred_filename, std::string const &fasta_filename) constcore::io::external::PsiPredInterfaceprivate
cmd_core::io::external::PsiPredInterfaceprivate
convert_to_fasta(std::string const &pname, std::string const &seq) constcore::io::external::PsiPredInterfaceprivate
create_fasta_file(std::string const &pname, std::string const &seq) constcore::io::external::PsiPredInterfaceprivate
operator=(const PsiPredInterface &)=deletecore::io::external::PsiPredInterface
parse_psipred_horiz_output(std::string const &psipred_horiz_filename) constcore::io::external::PsiPredInterfaceprivate
parse_psipred_output(std::string const &psipred_str, std::string const &blueprint_ss, std::string const &psipred_horiz_filename) constcore::io::external::PsiPredInterfaceprivate
parse_psipred_output_probabilities(std::string const &psipred_str) constcore::io::external::PsiPredInterfaceprivate
psipred_output_core::io::external::PsiPredInterfaceprivate
PsiPredInterface(std::string const &cmd, std::string const &scratch_dir="")core::io::external::PsiPredInterface
PsiPredInterface(PsiPredInterface const &rval)core::io::external::PsiPredInterface
run_psipred(core::pose::Pose const &pose, std::string const &blueprint_ss)core::io::external::PsiPredInterface
run_psipred_prob(core::pose::Pose const &pose)core::io::external::PsiPredInterface
scratch_dir_core::io::external::PsiPredInterfaceprivate
set_scratch_dir(std::string const &scratch_dir)core::io::external::PsiPredInterfaceprivate