Rosetta  2021.16
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AlignPDBInfoToSequencesUtil.cc File Reference

helper functions for AlignPDBInfoToSequences More...

#include <protocols/pdbinfo_manipulations/AlignPDBInfoToSequencesUtil.hh>
#include <core/sequence/Sequence.hh>
#include <basic/Tracer.hh>
#include <utility/string_util.hh>
#include <string>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::pdbinfo_manipulations
 

Functions

static basic::Tracer TR ("protocols.pdbinfo_manipulations.AlignPDBInfoToSequencesUtil")
 
void protocols::pdbinfo_manipulations::pad_sequences (std::string const &full_seq_1, core::sequence::SequenceOP const &aln_seq_1, std::string const &full_seq_2, core::sequence::SequenceOP const &aln_seq_2)
 Take two sequences that have been aligned, and their parent sequences and align/pad them with '-' as shown below: More...
 

Detailed Description

helper functions for AlignPDBInfoToSequences

Author
Dan Farrell (danpf.nosp@m.@uw..nosp@m.edu)

Function Documentation

static basic::Tracer TR ( "protocols.pdbinfo_manipulations.AlignPDBInfoToSequencesUtil"  )
static