protocols::task_operations::RestrictNonSurfaceToRepackingOperation Class Reference

#include <RestrictNonSurfaceToRepackingOperation.hh>

Inheritance diagram for protocols::task_operations::RestrictNonSurfaceToRepackingOperation:

Public Types
typedef core::pack::task::operation::TaskOperationOP	TaskOperationOP
Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP	TagCOP
typedef basic::datacache::DataMap	DataMap
typedef pose::Pose	Pose

Public Member Functions
	RestrictNonSurfaceToRepackingOperation ()
	RestrictNonSurfaceToRepackingOperation (core::Size nb_cutoff)
	~RestrictNonSurfaceToRepackingOperation () override
TaskOperationOP	clone () const override
	Create another task operation of the type matching the most-derived version of the class. More...
void	surface_exposed_nb_cutoff (core::Size const nb_count)
void	apply (core::pose::Pose const &pose, core::pack::task::PackerTask &task) const override
	Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
void	parse_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &dm) override
	Used to parse an xml-like tag to load parameters and properties. More...
Public Member Functions inherited from core::pack::task::operation::TaskOperation
	~TaskOperation () override
virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
static std::string	keyname ()

Private Attributes
core::Size	surface_exposed_nb_cutoff_

Detailed Description

this class is a TaskOperation to allow design of only surface exposed positions

Member Typedef Documentation

TaskOperationOP

typedef core::pack::task::operation::TaskOperationOP protocols::task_operations::RestrictNonSurfaceToRepackingOperation::TaskOperationOP

Constructor & Destructor Documentation

RestrictNonSurfaceToRepackingOperation() [1/2]

protocols::task_operations::RestrictNonSurfaceToRepackingOperation::RestrictNonSurfaceToRepackingOperation

(

)

RestrictNonSurfaceToRepackingOperation() [2/2]

protocols::task_operations::RestrictNonSurfaceToRepackingOperation::RestrictNonSurfaceToRepackingOperation

(

core::Size

nb_cutoff

)

References surface_exposed_nb_cutoff_.

~RestrictNonSurfaceToRepackingOperation()

protocols::task_operations::RestrictNonSurfaceToRepackingOperation::~RestrictNonSurfaceToRepackingOperation ( )

overridedefault

Member Function Documentation

apply()

void protocols::task_operations::RestrictNonSurfaceToRepackingOperation::apply ( core::pose::Pose const &  , core::pack::task::PackerTask &    ) const

overridevirtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::TaskOperation.

References core::pose::Pose::conformation(), core::pack::task::PackerTask::nonconst_residue_task(), core::conformation::residue_point_graph_from_conformation(), core::pack::task::ResidueLevelTask::restrict_to_repacking(), core::pose::Pose::size(), and surface_exposed_nb_cutoff_.

clone()

TaskOperationOP protocols::task_operations::RestrictNonSurfaceToRepackingOperation::clone ( ) const

overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

keyname()

static std::string protocols::task_operations::RestrictNonSurfaceToRepackingOperation::keyname ( )

inlinestatic

Referenced by protocols::task_operations::RestrictNonSurfaceToRepackingOperationCreator::keyname(), and provide_xml_schema().

parse_tag()

void protocols::task_operations::RestrictNonSurfaceToRepackingOperation::parse_tag ( utility::tag::TagCOP  tag, basic::datacache::DataMap &    )

overridevirtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

References surface_exposed_nb_cutoff_.

provide_xml_schema()

void protocols::task_operations::RestrictNonSurfaceToRepackingOperation::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

References keyname(), and core::pack::task::operation::task_op_schema_w_attributes().

Referenced by protocols::task_operations::RestrictNonSurfaceToRepackingOperationCreator::provide_xml_schema().

surface_exposed_nb_cutoff()

void protocols::task_operations::RestrictNonSurfaceToRepackingOperation::surface_exposed_nb_cutoff

(

core::Size const

nb_count

)

References surface_exposed_nb_cutoff_.

Member Data Documentation

surface_exposed_nb_cutoff_

core::Size protocols::task_operations::RestrictNonSurfaceToRepackingOperation::surface_exposed_nb_cutoff_

private

Referenced by apply(), parse_tag(), RestrictNonSurfaceToRepackingOperation(), and surface_exposed_nb_cutoff().

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The documentation for this class was generated from the following files:

• src/protocols/task_operations/RestrictNonSurfaceToRepackingOperation.hh
• src/protocols/task_operations/RestrictNonSurfaceToRepackingOperation.cc