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protocols::pose_selectors::ClusterPoseSelector Class Reference

Cluster poses by some real property as reported by the connected reporter (RMSD, ...) More...

#include <ClusterPoseSelector.hh>

Inheritance diagram for protocols::pose_selectors::ClusterPoseSelector:
Inheritance graph
[legend]

Public Member Functions

 ClusterPoseSelector ()
 
 ~ClusterPoseSelector () override=default
 
std::string get_name () const override
 Each derived selector must specify its name. More...
 
rosetta_scripts::PoseSelectorFlags get_flags () const override
 Report selector flags. More...
 
void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &data) override
 Called by PoseSelectorFactory when constructing new PoseSelectors. Takes care of the specific selector's parsing. More...
 
utility::vector1< boolselect_poses (utility::vector1< core::pose::PoseOP > poses) override
 Select poses from provided vector by applying the selection criteria parsed from Tag. More...
 

Static Public Member Functions

static std::string name ()
 
static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
 
- Static Public Member Functions inherited from protocols::rosetta_scripts::PoseSelector
static std::string name ()
 

Private Attributes

protocols::rosetta_scripts::PosePropertyReporterOP reporter_
 
core::Real radius_
 
core::Size structures_per_cluster_
 
core::Size max_cluster_size_
 
core::Size max_clusters_
 
core::Size max_structures_
 
core::Size initial_cluster_set_size_
 
bool remove_singletons_
 

Additional Inherited Members

- Protected Member Functions inherited from protocols::rosetta_scripts::PoseSelector
 PoseSelector ()
 
 ~PoseSelector () override
 

Detailed Description

Cluster poses by some real property as reported by the connected reporter (RMSD, ...)

Constructor & Destructor Documentation

protocols::pose_selectors::ClusterPoseSelector::ClusterPoseSelector ( )
protocols::pose_selectors::ClusterPoseSelector::~ClusterPoseSelector ( )
overridedefault

Member Function Documentation

rosetta_scripts::PoseSelectorFlags protocols::pose_selectors::ClusterPoseSelector::get_flags ( ) const
inlineoverridevirtual
std::string protocols::pose_selectors::ClusterPoseSelector::get_name ( ) const
inlineoverridevirtual

Each derived selector must specify its name.

Implements protocols::rosetta_scripts::PoseSelector.

References name().

Referenced by select_poses().

static std::string protocols::pose_selectors::ClusterPoseSelector::name ( )
inlinestatic

Referenced by get_name(), and provide_xml_schema().

void protocols::pose_selectors::ClusterPoseSelector::parse_my_tag ( utility::tag::TagCOP  tag,
basic::datacache::DataMap &  data 
)
overridevirtual

Called by PoseSelectorFactory when constructing new PoseSelectors. Takes care of the specific selector's parsing.

Reimplemented from protocols::rosetta_scripts::PoseSelector.

References initial_cluster_set_size_, max_cluster_size_, max_clusters_, max_structures_, radius_, remove_singletons_, reporter_, structures_per_cluster_, and protocols::TR().

void protocols::pose_selectors::ClusterPoseSelector::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)
static
utility::vector1< bool > protocols::pose_selectors::ClusterPoseSelector::select_poses ( utility::vector1< core::pose::PoseOP poses)
overridevirtual

Member Data Documentation

core::Size protocols::pose_selectors::ClusterPoseSelector::initial_cluster_set_size_
private

Referenced by parse_my_tag(), and select_poses().

core::Size protocols::pose_selectors::ClusterPoseSelector::max_cluster_size_
private

Referenced by parse_my_tag(), and select_poses().

core::Size protocols::pose_selectors::ClusterPoseSelector::max_clusters_
private

Referenced by parse_my_tag(), and select_poses().

core::Size protocols::pose_selectors::ClusterPoseSelector::max_structures_
private

Referenced by parse_my_tag(), and select_poses().

core::Real protocols::pose_selectors::ClusterPoseSelector::radius_
private

Referenced by parse_my_tag(), and select_poses().

bool protocols::pose_selectors::ClusterPoseSelector::remove_singletons_
private

Referenced by parse_my_tag(), and select_poses().

protocols::rosetta_scripts::PosePropertyReporterOP protocols::pose_selectors::ClusterPoseSelector::reporter_
private

Referenced by parse_my_tag(), and select_poses().

core::Size protocols::pose_selectors::ClusterPoseSelector::structures_per_cluster_
private

Referenced by parse_my_tag(), and select_poses().


The documentation for this class was generated from the following files: