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protocols::loops::loop_mover::refine Namespace Reference

Classes

class  LoopMover_Refine_Backrub
 
class  LoopMover_Refine_BackrubCreator
 creator for the LoopMover_Refine_BackrubCreator class More...
 
class  LoopMover_Refine_CCD
 
class  LoopMover_Refine_CCDCreator
 creator for the LoopMover_Refine_CCDCreator class More...
 
class  LoopMover_Refine_KIC
 
class  LoopMover_Refine_KICCreator
 creator for the LoopMover_Perturb_KICCreator class More...
 
class  LoopRefineInnerCycle
 
class  LoopRefineInnerCycleContainer
 
class  LoopRefineInnerCycleContainerCreator
 creator for the LoopRefineInnerCycleContainer class More...
 
class  LoopRefineInnerCycleFactory
 Create LoopMover Reporters. More...
 
class  RepackTrial
 
class  RepackTrialCreator
 creator for the RepackTrial class More...
 
class  ShearMinCCDTrial
 
class  ShearMinCCDTrialCreator
 creator for the ShearMinCCDTrial class More...
 
class  SmallMinCCDTrial
 
class  SmallMinCCDTrialCreator
 creator for the SmallMinCCDTrial class More...
 

Typedefs

typedef
utility::pointer::shared_ptr
< LoopMover_Refine_Backrub
LoopMover_Refine_BackrubOP
 
typedef
utility::pointer::shared_ptr
< LoopMover_Refine_Backrub
const > 
LoopMover_Refine_BackrubCOP
 
typedef
utility::pointer::shared_ptr
< LoopMover_Refine_CCD
LoopMover_Refine_CCDOP
 
typedef
utility::pointer::shared_ptr
< LoopMover_Refine_CCD const > 
LoopMover_Refine_CCDCOP
 
typedef
utility::pointer::weak_ptr
< LoopMover_Refine_CCD
LoopMover_Refine_CCDAP
 
typedef
utility::pointer::weak_ptr
< LoopMover_Refine_CCD const > 
LoopMover_Refine_CCDCAP
 
typedef
utility::pointer::shared_ptr
< LoopMover_Refine_KIC
LoopMover_Refine_KICOP
 
typedef
utility::pointer::shared_ptr
< LoopMover_Refine_KIC const > 
LoopMover_Refine_KICCOP
 
typedef
utility::pointer::shared_ptr
< LoopRefineInnerCycle
LoopRefineInnerCycleOP
 
typedef
utility::pointer::shared_ptr
< LoopRefineInnerCycle const > 
LoopRefineInnerCycleCOP
 
typedef
utility::pointer::shared_ptr
< LoopRefineInnerCycleContainer
LoopRefineInnerCycleContainerOP
 
typedef
utility::pointer::shared_ptr
< LoopRefineInnerCycleContainer
const > 
LoopRefineInnerCycleContainerCOP
 
typedef
utility::pointer::shared_ptr
< RepackTrial
RepackTrialOP
 
typedef
utility::pointer::shared_ptr
< RepackTrial const > 
RepackTrialCOP
 
typedef
utility::pointer::shared_ptr
< ShearMinCCDTrial
ShearMinCCDTrialOP
 
typedef
utility::pointer::shared_ptr
< ShearMinCCDTrial const > 
ShearMinCCDTrialCOP
 
typedef
utility::pointer::shared_ptr
< SmallMinCCDTrial
SmallMinCCDTrialOP
 
typedef
utility::pointer::shared_ptr
< SmallMinCCDTrial const > 
SmallMinCCDTrialCOP
 

Enumerations

enum  LoopRefineInnerCycleName {
  IC_SmallMinCCDTrial = 1, IC_ShearMinCCDTrial, IC_RepackTrial, IC_RefineCCDStandard,
  number_of_loop_refine_inner_cycle_names = IC_RefineCCDStandard
}
 

Functions

static basic::Tracer TR ("protocols.loops..LoopMover_Refine_Backrub")
 
static basic::Tracer TR ("protocols.loops.loop_mover.refine.LoopMover_Refine_CCD")
 
std::ostream & operator<< (std::ostream &os, LoopMover_Refine_CCD const &mover)
 
static basic::Tracer TR ("protocols.loops.loop_mover.refine.LoopMover_Refine_KIC")
 
std::ostream & operator<< (std::ostream &os, LoopMover_Refine_KIC const &mover)
 
std::ostream & operator<< (std::ostream &out, LoopRefineInnerCycle const &loop_refine_inner_cycle)
 
std::ostream & operator<< (std::ostream &out, LoopRefineInnerCycleContainer const &loop_refine_inner_cycle_container)
 
static basic::Tracer TR ("protocols.loops.loop_mover.refine.LoopRefineInnerCycleFactory")
 
std::ostream & operator<< (std::ostream &out, RepackTrial const &repack_trial)
 
std::ostream & operator<< (std::ostream &out, ShearMinCCDTrial const &loop_refine_shear_CCD_min_trial_inner_cycle)
 
std::ostream & operator<< (std::ostream &out, SmallMinCCDTrial const &small_min_ccd_trial)
 

Variables

Real const CHAINBREAK_SCORE_RAMP_FACTOR = 10./3.
 

Typedef Documentation

typedef utility::pointer::shared_ptr< RepackTrial const > protocols::loops::loop_mover::refine::RepackTrialCOP
typedef utility::pointer::shared_ptr< RepackTrial > protocols::loops::loop_mover::refine::RepackTrialOP
typedef utility::pointer::shared_ptr< ShearMinCCDTrial const > protocols::loops::loop_mover::refine::ShearMinCCDTrialCOP
typedef utility::pointer::shared_ptr< SmallMinCCDTrial const > protocols::loops::loop_mover::refine::SmallMinCCDTrialCOP

Enumeration Type Documentation

Enumerator
IC_SmallMinCCDTrial 
IC_ShearMinCCDTrial 
IC_RepackTrial 
IC_RefineCCDStandard 
number_of_loop_refine_inner_cycle_names 

Function Documentation

std::ostream& protocols::loops::loop_mover::refine::operator<< ( std::ostream &  out,
RepackTrial const &  repack_trial 
)
std::ostream & protocols::loops::loop_mover::refine::operator<< ( std::ostream &  os,
LoopMover_Refine_CCD const &  mover 
)
std::ostream& protocols::loops::loop_mover::refine::operator<< ( std::ostream &  out,
ShearMinCCDTrial const &  loop_refine_shear_CCD_min_trial_inner_cycle 
)
std::ostream& protocols::loops::loop_mover::refine::operator<< ( std::ostream &  out,
LoopRefineInnerCycleContainer const &  loop_refine_inner_cycle_container 
)
std::ostream& protocols::loops::loop_mover::refine::operator<< ( std::ostream &  out,
LoopRefineInnerCycle const &  loop_refine_inner_cycle 
)
std::ostream& protocols::loops::loop_mover::refine::operator<< ( std::ostream &  out,
SmallMinCCDTrial const &  small_min_ccd_trial 
)
std::ostream & protocols::loops::loop_mover::refine::operator<< ( std::ostream &  os,
LoopMover_Refine_KIC const &  mover 
)
static basic::Tracer protocols::loops::loop_mover::refine::TR ( "protocols.loops.loop_mover.refine.LoopRefineInnerCycleFactory"  )
static
static basic::Tracer protocols::loops::loop_mover::refine::TR ( "protocols.loops..LoopMover_Refine_Backrub"  )
static
static basic::Tracer protocols::loops::loop_mover::refine::TR ( "protocols.loops.loop_mover.refine.LoopMover_Refine_CCD"  )
static
static basic::Tracer protocols::loops::loop_mover::refine::TR ( "protocols.loops.loop_mover.refine.LoopMover_Refine_KIC"  )
static

Variable Documentation

Real const protocols::loops::loop_mover::refine::CHAINBREAK_SCORE_RAMP_FACTOR = 10./3.