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protocols::ligand_docking::HighResDocker Member List

This is the complete list of members for protocols::ligand_docking::HighResDocker, including all inherited members.

all_residues_protocols::ligand_docking::HighResDockerprivate
allow_minimization_protocols::ligand_docking::HighResDockerprivate
allow_repacking_protocols::ligand_docking::HighResDockerprivate
apply(core::pose::Pose &pose) overrideprotocols::ligand_docking::HighResDockervirtual
apply(utility::vector1< core::pose::Pose > &poses, utility::vector1< core::Real > &current_scores, utility::vector1< char > qsar_chars, core::Size cycle)protocols::ligand_docking::HighResDocker
apply(core::pose::Pose &pose, core::Real &current_score, char qsar_char, core::Size cycle)protocols::ligand_docking::HighResDocker
apply_rigid_body_moves(core::pose::Pose &pose, utility::vector1< protocols::moves::MoverOP > &rigid_body_movers)protocols::ligand_docking::HighResDockerprotected
chains_protocols::ligand_docking::HighResDockerprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::ligand_docking::HighResDockervirtual
create()protocols::moves::Movervirtual
create_rigid_body_movers(core::pose::Pose const &pose) constprotocols::ligand_docking::HighResDockerprotected
current_job_protocols::moves::Moverprivate
current_tag_protocols::moves::Moverprivate
enable_ligand_rotamer_packing(core::pose::Pose const &pose, core::Size const ligand_residue_id, core::pack::task::PackerTaskOP &pack_task) constprotocols::ligand_docking::HighResDockerprotected
fresh_instance() const overrideprotocols::ligand_docking::HighResDockervirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() constprotocols::moves::Mover
get_current_tag() constprotocols::moves::Moverinline
get_input_pose() constprotocols::moves::Mover
get_last_move_status() constprotocols::moves::Mover
get_name() const overrideprotocols::ligand_docking::HighResDockervirtual
get_native_pose() constprotocols::moves::Mover
get_self_ptr() constprotocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() constprotocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() constprotocols::moves::Moverinline
HighResDocker()protocols::ligand_docking::HighResDocker
HighResDocker(HighResDocker const &that)protocols::ligand_docking::HighResDocker
HighResDocker(core::Size num_cycles, core::Size repack_every_Nth, core::scoring::ScoreFunctionOP score_fxn, MoveMapBuilderOP movemap_builder, std::string const &resfile="")protocols::ligand_docking::HighResDocker
info()protocols::moves::Moverinlinevirtual
info() constprotocols::moves::Moverinlinevirtual
info_protocols::moves::Moverprivate
initialize_from_options()protocols::ligand_docking::HighResDockerprotected
input_pose_protocols::moves::Moverprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
last_status_protocols::moves::Moverprivate
make_packer_task(core::pose::Pose const &pose, bool all_residues=false) constprotocols::ligand_docking::HighResDockerprotected
make_packer_task_from_vector(core::pose::Pose const &pose, ligand_options::Interface const &allow_repack) constprotocols::ligand_docking::HighResDockerprotected
movemap_builder_protocols::ligand_docking::HighResDockerprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
mover_name()protocols::ligand_docking::HighResDockerstatic
name()protocols::moves::Moverinlinestatic
native_pose_protocols::moves::Moverprivate
num_cycles_protocols::ligand_docking::HighResDockerprivate
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) overrideprotocols::ligand_docking::HighResDockervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const overrideprotocols::ligand_docking::HighResDockervirtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)protocols::ligand_docking::HighResDockerstatic
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() constprotocols::moves::Movervirtual
reinitialize_for_new_input() constprotocols::moves::Movervirtual
remove_ligand_dihedral_restraints(core::pose::Pose &pose, MinimizeLigandOPs &minimized_ligands) constprotocols::ligand_docking::HighResDockerprotected
remove_ligand_tethers(core::pose::Pose pose, TetherLigandOPs ligand_tethers)protocols::ligand_docking::HighResDockerprotected
repack_every_Nth_protocols::ligand_docking::HighResDockerprivate
reset_status()protocols::moves::Mover
resfile_protocols::ligand_docking::HighResDockerprivate
score_fxn_protocols::ligand_docking::HighResDockerprivate
set_all_residues(bool input)protocols::ligand_docking::HighResDocker
set_allow_repacking(bool input)protocols::ligand_docking::HighResDocker
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_type(std::string const &setting)protocols::moves::Moverinline
setup_ligands_to_minimize(core::pose::Pose &pose, char chain=0)protocols::ligand_docking::HighResDockerprotected
show(std::ostream &output=std::cout) constprotocols::moves::Movervirtual
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
tether_ligands(core::pose::Pose &pose, char chain=0)protocols::ligand_docking::HighResDockerprotected
type(const std::string &type_in)protocols::moves::Moverinline
type() constprotocols::moves::Moverinline
type_protocols::moves::Moverprivate
~HighResDocker() overrideprotocols::ligand_docking::HighResDocker