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ConstraintFragmentSampler.cc File Reference

ab-initio fragment assembly protocol for proteins More...

#include <protocols/abinitio/ConstraintFragmentSampler.hh>
#include <protocols/topology_broker/TopologyBroker.hh>
#include <core/pose/Pose.hh>
#include <core/types.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreType.hh>
#include <core/scoring/constraints/ConstraintSet.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <protocols/moves/TrialMover.hh>
#include <utility/exit.hh>
#include <utility/vector1.fwd.hh>
#include <utility/VirtualBase.hh>
#include <numeric/numeric.functions.hh>
#include <basic/prof.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/fold_cst.OptionKeys.gen.hh>
#include <basic/options/keys/jumps.OptionKeys.gen.hh>
#include <basic/options/keys/constraints.OptionKeys.gen.hh>
#include <cstdlib>
#include <string>
#include <core/kinematics/ShortestPathInFoldTree.hh>
#include <protocols/constraints_additional/MaxSeqSepConstraintSet.hh>
#include <utility/vector1.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::abinitio
 

Functions

static basic::Tracer tr ("protocols.abinitio")
 
Size seq_sep_stage (core::Size total_res, Real factor)
 

Detailed Description

ab-initio fragment assembly protocol for proteins

Contains currently: Classic Abinitio

Author
Oliver Lange
James Thompson
Mike Tyka
Christopher Miles (cmile.nosp@m.s@uw.nosp@m..edu)

Function Documentation

Size seq_sep_stage ( core::Size  total_res,
Real  factor 
)
static basic::Tracer tr ( "protocols.abinitio"  )
static