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StepWiseRNA_OutputData.cc File Reference

Output silent_file_data functions for Stepwise Assembly RNA. More...

#include <protocols/stepwise/modeler/rna/StepWiseRNA_OutputData.hh>
#include <protocols/stepwise/modeler/rna/util.hh>
#include <protocols/stepwise/modeler/rna/rigid_body/util.hh>
#include <protocols/stepwise/modeler/working_parameters/StepWiseWorkingParameters.hh>
#include <protocols/stepwise/sampler/rigid_body/EulerAngles.hh>
#include <core/types.hh>
#include <core/chemical/ChemicalManager.hh>
#include <core/chemical/ResidueTypeSet.fwd.hh>
#include <core/conformation/Residue.hh>
#include <core/pose/Pose.hh>
#include <core/io/silent/SilentFileData.hh>
#include <core/io/silent/SilentFileOptions.hh>
#include <core/io/silent/BinarySilentStruct.hh>
#include <numeric/NumericTraits.hh>
#include <utility/file/file_sys_util.hh>
#include <basic/Tracer.hh>
#include <fstream>
#include <map>
#include <core/id/AtomID.hh>
#include <core/scoring/rms_util.hh>
#include <ObjexxFCL/string.functions.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::stepwise
 
 protocols::stepwise::modeler
 
 protocols::stepwise::modeler::rna
 

Functions

static basic::Tracer TR ("protocols.stepwise.modeler.rna.StepWiseRNA_OutputData")
 
void protocols::stepwise::modeler::rna::output_data (std::string const &silent_file, std::string const &tag, bool const write_score_only, pose::Pose const &pose, core::pose::PoseCOP native_poseCOP, working_parameters::StepWiseWorkingParametersCOP working_parameters_, bool const NAT_rmsd)
 
void protocols::stepwise::modeler::rna::output_data (core::io::silent::SilentFileData &silent_file_data, std::string const &silent_file, std::string const &tag, bool const write_score_only, pose::Pose const &pose, core::pose::PoseCOP native_poseCOP, working_parameters::StepWiseWorkingParametersCOP working_parameters_, bool const NAT_rmsd)
 
core::io::silent::BinarySilentStruct protocols::stepwise::modeler::rna::get_binary_rna_silent_struct_safe (pose::Pose const &const_pose, std::string const &tag, std::string const &silent_file)
 
core::io::silent::BinarySilentStruct protocols::stepwise::modeler::rna::get_binary_rna_silent_struct_safe_wrapper (pose::Pose const &const_pose, std::string const &tag, std::string const &silent_file, bool const write_score_only)
 

Detailed Description

Output silent_file_data functions for Stepwise Assembly RNA.

(created on Sept 26, 2011)

Author
Parin Sripakdeevong

Function Documentation

◆ TR()

static basic::Tracer TR ( "protocols.stepwise.modeler.rna.StepWiseRNA_OutputData"  )
static