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protocols::legacy_sewing::LegacyRepeatAssemblyMover Member List

This is the complete list of members for protocols::legacy_sewing::LegacyRepeatAssemblyMover, including all inherited members.

add_repeats(AssemblyOP assembly) constprotocols::legacy_sewing::LegacyRepeatAssemblyMover
add_starting_model(AssemblyOP assembly) constprotocols::legacy_sewing::LegacyAssemblyMovervirtual
append_movie_frame(AssemblyOP assembly, core::Size cycle) constprotocols::legacy_sewing::LegacyAssemblyMover
apply(core::pose::Pose &pose) overrideprotocols::legacy_sewing::LegacyAssemblyMovervirtual
assembly_scorefxn_protocols::legacy_sewing::LegacyAssemblyMoverprotected
base_native_bonus_protocols::legacy_sewing::LegacyAssemblyMoverprotected
cen_scorefxn_protocols::legacy_sewing::LegacyAssemblyMoverprotected
clash_scorefxn_protocols::legacy_sewing::LegacyRepeatAssemblyMoverprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::legacy_sewing::LegacyRepeatAssemblyMovervirtual
create()protocols::moves::Movervirtual
current_job_protocols::moves::Moverprivate
current_tag_protocols::moves::Moverprivate
define_assembly_mover_ct_gen(utility::tag::XMLSchemaDefinition &xsd)protocols::legacy_sewing::LegacyAssemblyMoverstatic
dfs_cycle_finder(ModelNode const *reference_node, utility::vector1< ModelNode const * > visited_nodes, AssemblyOP assembly) constprotocols::legacy_sewing::LegacyRepeatAssemblyMover
edge_file_protocols::legacy_sewing::LegacyAssemblyMoverprotected
fa_scorefxn_protocols::legacy_sewing::LegacyAssemblyMoverprotected
follow_random_edge_from_node(AssemblyOP assembly, ModelNode const *reference_node) constprotocols::legacy_sewing::LegacyAssemblyMover
fresh_instance() const overrideprotocols::legacy_sewing::LegacyRepeatAssemblyMovervirtual
generate_assembly() overrideprotocols::legacy_sewing::LegacyRepeatAssemblyMovervirtual
get_additional_output()protocols::moves::Movervirtual
get_centroid_pose(AssemblyOP assembly) constprotocols::legacy_sewing::LegacyAssemblyMovervirtual
get_current_job() constprotocols::moves::Mover
get_current_tag() constprotocols::moves::Moverinline
get_fullatom_pose(AssemblyOP assembly) constprotocols::legacy_sewing::LegacyAssemblyMovervirtual
get_input_pose() constprotocols::moves::Mover
get_last_move_status() constprotocols::moves::Mover
get_name() const overrideprotocols::legacy_sewing::LegacyRepeatAssemblyMovervirtual
get_native_pose() constprotocols::moves::Mover
get_segment_coords(SewSegment const &segment) constprotocols::legacy_sewing::LegacyRepeatAssemblyMover
get_self_ptr() constprotocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() constprotocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() constprotocols::moves::Moverinline
graph_protocols::legacy_sewing::LegacyAssemblyMoverprotected
info()protocols::moves::Moverinlinevirtual
info() constprotocols::moves::Moverinlinevirtual
info_protocols::moves::Moverprivate
input_pose_protocols::moves::Moverprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
last_status_protocols::moves::Moverprivate
legacy_assembly_mover_ct_namer(std::string const &)protocols::legacy_sewing::LegacyAssemblyMoverstatic
LegacyAssemblyMover()protocols::legacy_sewing::LegacyAssemblyMover
LegacyRepeatAssemblyMover()protocols::legacy_sewing::LegacyRepeatAssemblyMover
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
mover_name()protocols::legacy_sewing::LegacyRepeatAssemblyMoverstatic
name()protocols::moves::Moverinlinestatic
native_pose_protocols::moves::Moverprivate
neighbor_cutoff_protocols::legacy_sewing::LegacyAssemblyMoverprotected
num_repeating_segments_protocols::legacy_sewing::LegacyRepeatAssemblyMoverprivate
num_repeats_protocols::legacy_sewing::LegacyRepeatAssemblyMoverprivate
num_trials_protocols::legacy_sewing::LegacyRepeatAssemblyMoverprivate
output_base_stats(AssemblyOP const &assembly)protocols::legacy_sewing::LegacyRepeatAssemblyMover
output_stats(AssemblyOP const &assembly, core::pose::Pose &pose, std::string indicator_whether_from_LegacyMonteCarloAssemblyMover_or_LegacyExhaustiveAssemblyMover)protocols::legacy_sewing::LegacyAssemblyMovervirtual
parent typedefprotocols::legacy_sewing::LegacyRepeatAssemblyMover
parse_global_requirements(TagCOP tag, basic::datacache::DataMap &data)protocols::legacy_sewing::LegacyAssemblyMovervirtual
parse_intra_segment_requirements(TagCOP tag, basic::datacache::DataMap &data)protocols::legacy_sewing::LegacyAssemblyMovervirtual
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data) overrideprotocols::legacy_sewing::LegacyRepeatAssemblyMovervirtual
parse_requirements(TagCOP tag, basic::datacache::DataMap &data)protocols::legacy_sewing::LegacyAssemblyMovervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) constprotocols::moves::Movervirtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)protocols::legacy_sewing::LegacyRepeatAssemblyMoverstatic
refine_assembly(AssemblyOP &assembly) overrideprotocols::legacy_sewing::LegacyRepeatAssemblyMovervirtual
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() constprotocols::moves::Movervirtual
reinitialize_for_new_input() const overrideprotocols::legacy_sewing::LegacyAssemblyMovervirtual
requirement_factory_protocols::legacy_sewing::LegacyAssemblyMoverprotected
requirement_set_protocols::legacy_sewing::LegacyAssemblyMoverprotected
reset_status()protocols::moves::Mover
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_type(std::string const &setting)protocols::moves::Moverinline
show(std::ostream &output=std::cout) constprotocols::moves::Movervirtual
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
threshold_score_of_complete_cycle_protocols::legacy_sewing::LegacyRepeatAssemblyMoverprivate
transform_segment_coords(SewSegment &segment, numeric::xyzTransform< core::Real > transformer, numeric::xyzVector< float > com, core::Size n_transformations) constprotocols::legacy_sewing::LegacyRepeatAssemblyMover
type(const std::string &type_in)protocols::moves::Moverinline
type() constprotocols::moves::Moverinline
type_protocols::moves::Moverprivate