Public Member Functions | Static Public Member Functions | Private Attributes | List of all members
protocols::simple_filters::DisulfideEntropyFilter Class Reference

#include <DisulfideEntropyFilter.hh>

Inheritance diagram for protocols::simple_filters::DisulfideEntropyFilter:
Inheritance graph

Public Member Functions

 DisulfideEntropyFilter ()
 DisulfideEntropyFilter (core::Real tightness_, core::Real lower_bound_)
 DisulfideEntropyFilter (DisulfideEntropyFilter const &src)
 ~DisulfideEntropyFilter () override
bool apply (core::pose::Pose const &pose) const override
 Returns true if the given pose passes the filter, false otherwise. More...
filters::FilterOP clone () const override
filters::FilterOP fresh_instance () const override
void report (std::ostream &out, core::pose::Pose const &pose) const override
core::Real report_sm (core::pose::Pose const &pose) const override
 used to report filter internals through a score or silent file More...
core::Real compute_residual (core::pose::Pose const &pose) const
core::Real compute (core::pose::Pose const &pose) const
void parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override
 Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing. More...
core::Real lower_bound () const
void lower_bound (core::Real value)
core::Real tightness () const
void tightness (core::Real value)
std::string name () const override
- Public Member Functions inherited from protocols::filters::Filter
 Filter ()
 Filter (std::string const &)
 ~Filter () override
virtual std::string get_type () const
std::string get_user_defined_name () const
void set_user_defined_name (std::string const &name)
virtual void clear ()
 used to clear internal variables if needed. Using fresh_instance is preferred since it's a pure virtual More...
virtual core::Real score (core::pose::Pose &pose)
virtual void provide_citation_info (basic::citation_manager::CitationCollectionList &) const
 Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions

static std::string class_name ()
static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

Private Attributes

core::Real tightness_
core::Real lower_bound_

Additional Inherited Members

- Protected Attributes inherited from protocols::filters::Filter
std::string scorename_

Constructor & Destructor Documentation

◆ DisulfideEntropyFilter() [1/3]

protocols::simple_filters::DisulfideEntropyFilter::DisulfideEntropyFilter ( )

◆ DisulfideEntropyFilter() [2/3]

protocols::simple_filters::DisulfideEntropyFilter::DisulfideEntropyFilter ( core::Real  tightness_,
core::Real  lower_bound_ 

◆ DisulfideEntropyFilter() [3/3]

protocols::simple_filters::DisulfideEntropyFilter::DisulfideEntropyFilter ( DisulfideEntropyFilter const &  src)

◆ ~DisulfideEntropyFilter()

protocols::simple_filters::DisulfideEntropyFilter::~DisulfideEntropyFilter ( )

Member Function Documentation

◆ apply()

bool protocols::simple_filters::DisulfideEntropyFilter::apply ( core::pose::Pose const &  pose) const

◆ class_name()

std::string protocols::simple_filters::DisulfideEntropyFilter::class_name ( )

◆ clone()

filters::FilterOP protocols::simple_filters::DisulfideEntropyFilter::clone ( ) const

◆ compute()

core::Real protocols::simple_filters::DisulfideEntropyFilter::compute ( core::pose::Pose const &  pose) const

◆ compute_residual()

core::Real protocols::simple_filters::DisulfideEntropyFilter::compute_residual ( core::pose::Pose const &  pose) const

◆ fresh_instance()

filters::FilterOP protocols::simple_filters::DisulfideEntropyFilter::fresh_instance ( ) const

◆ lower_bound() [1/2]

core::Real protocols::simple_filters::DisulfideEntropyFilter::lower_bound ( ) const

References lower_bound_.

Referenced by parse_my_tag().

◆ lower_bound() [2/2]

void protocols::simple_filters::DisulfideEntropyFilter::lower_bound ( core::Real  value)

References lower_bound_.

◆ name()

std::string protocols::simple_filters::DisulfideEntropyFilter::name ( ) const

Reimplemented from protocols::filters::Filter.

References class_name().

◆ parse_my_tag()

void protocols::simple_filters::DisulfideEntropyFilter::parse_my_tag ( utility::tag::TagCOP  ,

Called by FilterFactory when constructing new Filter. Takes care of the specific mover's parsing.

Reimplemented from protocols::filters::Filter.

References lower_bound(), tightness(), and protocols::simple_filters::TR().

◆ provide_xml_schema()

void protocols::simple_filters::DisulfideEntropyFilter::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)

◆ report()

void protocols::simple_filters::DisulfideEntropyFilter::report ( std::ostream &  out,
core::pose::Pose const &  pose 
) const

◆ report_sm()

core::Real protocols::simple_filters::DisulfideEntropyFilter::report_sm ( core::pose::Pose const &  ) const

used to report filter internals through a score or silent file

Reimplemented from protocols::filters::Filter.

References compute().

◆ tightness() [1/2]

core::Real protocols::simple_filters::DisulfideEntropyFilter::tightness ( ) const

References tightness_.

Referenced by parse_my_tag().

◆ tightness() [2/2]

void protocols::simple_filters::DisulfideEntropyFilter::tightness ( core::Real  value)

References tightness_.

Member Data Documentation

◆ lower_bound_

core::Real protocols::simple_filters::DisulfideEntropyFilter::lower_bound_

Referenced by apply(), and lower_bound().

◆ tightness_

core::Real protocols::simple_filters::DisulfideEntropyFilter::tightness_

Referenced by apply(), and tightness().

The documentation for this class was generated from the following files: