Rosetta  2020.46
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VIP_Mover.cc File Reference

Void Identification and Packing Mover. Identifies buried voids in an input structure and attempts to fill these using fixed backbone packing and the GOE energy. More...

#include <protocols/vip/VIP_Mover.hh>
#include <protocols/vip/VIP_Report.hh>
#include <protocols/vip/VIP_Utils.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/cp.OptionKeys.gen.hh>
#include <core/conformation/Residue.hh>
#include <core/kinematics/MoveMap.hh>
#include <core/scoring/Energies.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/ScoreFunctionFactory.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/ResfileReader.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/pose/PDBInfo.hh>
#include <protocols/relax/FastRelax.hh>
#include <protocols/relax/MiniRelax.hh>
#include <protocols/relax/ClassicRelax.hh>
#include <protocols/minimization_packing/MinMover.hh>
#include <protocols/simple_moves/AddCavitiesMover.hh>
#include <protocols/minimization_packing/PackRotamersMover.hh>
#include <protocols/simple_moves/ScoreMover.hh>
#include <iostream>
#include <fstream>
#include <algorithm>
#include <iterator>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::vip
 

Functions

core::Size num_stored_poses (0)
 
static basic::Tracer protocols::vip::TR ("VIP")
 
bool protocols::vip::are_seqs_different (core::pose::Pose &p1, core::pose::Pose &p2)
 

Detailed Description

Void Identification and Packing Mover. Identifies buried voids in an input structure and attempts to fill these using fixed backbone packing and the GOE energy.

Author
ben bborg.nosp@m.o@ge.nosp@m.netic.nosp@m.s.wu.nosp@m.stl.e.nosp@m.du

Function Documentation

core::Size num_stored_poses ( )