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protocols::task_operations::RestrictIdentitiesOperation Class Reference

#include <RestrictIdentitiesOperation.hh>

Inheritance diagram for protocols::task_operations::RestrictIdentitiesOperation:
Inheritance graph
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Public Member Functions

 RestrictIdentitiesOperation ()
 
 RestrictIdentitiesOperation (utility::vector1< std::string > const &identities, bool prevent_repacking)
 
core::pack::task::operation::TaskOperationOP clone () const override
 Create another task operation of the type matching the most-derived version of the class. More...
 
 ~RestrictIdentitiesOperation () override
 
utility::vector1< std::string > identities () const
 
bool prevent_repacking () const
 
void identities (utility::vector1< std::string > residues_vec)
 
void prevent_repacking (bool const prevent_repacking)
 
void apply (core::pose::Pose const &, core::pack::task::PackerTask &) const override
 Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
 
void parse_tag (TagCOP, DataMap &) override
 Used to parse an xml-like tag to load parameters and properties. More...
 
- Public Member Functions inherited from core::pack::task::operation::TaskOperation
 ~TaskOperation () override
 
virtual bool task_operation_provides_citation_info () const
 Does this task operation provide information about how to cite it? More...
 
virtual utility::vector1
< basic::citation_manager::CitationCollectionCOP > 
provide_citation_info () const
 Provide the citation. More...
 
virtual bool task_operation_is_unpublished () const
 Does this task_operation indicate that it is unpublished (and, by extension, that the author should be included in publications resulting from it)? More...
 
virtual utility::vector1
< basic::citation_manager::UnpublishedModuleInfoCOP > 
provide_authorship_info_for_unpublished () const
 Provide a list of authors and their e-mail addresses, as strings. More...
 

Static Public Member Functions

static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
 
static std::string keyname ()
 

Private Attributes

std::string unparsed_identities_
 
utility::vector1< std::string > identities_
 
bool prevent_repacking_
 

Additional Inherited Members

- Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP TagCOP
 
typedef basic::datacache::DataMap DataMap
 
typedef pose::Pose Pose
 

Detailed Description

this class is a TaskOperation to prevent repacking of residues not near an interface.

Constructor & Destructor Documentation

protocols::task_operations::RestrictIdentitiesOperation::RestrictIdentitiesOperation ( )
default
protocols::task_operations::RestrictIdentitiesOperation::RestrictIdentitiesOperation ( utility::vector1< std::string > const &  identities,
bool  prevent_repacking 
)
protocols::task_operations::RestrictIdentitiesOperation::~RestrictIdentitiesOperation ( )
overridedefault

Member Function Documentation

void protocols::task_operations::RestrictIdentitiesOperation::apply ( core::pose::Pose const &  ,
core::pack::task::PackerTask  
) const
overridevirtual
core::pack::task::operation::TaskOperationOP protocols::task_operations::RestrictIdentitiesOperation::clone ( ) const
overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

utility::vector1< std::string > protocols::task_operations::RestrictIdentitiesOperation::identities ( ) const

References identities_.

void protocols::task_operations::RestrictIdentitiesOperation::identities ( utility::vector1< std::string >  residues_vec)

References identities_.

static std::string protocols::task_operations::RestrictIdentitiesOperation::keyname ( )
inlinestatic
void protocols::task_operations::RestrictIdentitiesOperation::parse_tag ( TagCOP  tag,
DataMap  
)
overridevirtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

References identities_, prevent_repacking(), prevent_repacking_, protocols::task_operations::TR(), and unparsed_identities_.

bool protocols::task_operations::RestrictIdentitiesOperation::prevent_repacking ( ) const

References prevent_repacking_.

Referenced by parse_tag(), and prevent_repacking().

void protocols::task_operations::RestrictIdentitiesOperation::prevent_repacking ( bool const  prevent_repacking)
void protocols::task_operations::RestrictIdentitiesOperation::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)
static

Member Data Documentation

utility::vector1< std::string > protocols::task_operations::RestrictIdentitiesOperation::identities_
private

Referenced by apply(), identities(), and parse_tag().

bool protocols::task_operations::RestrictIdentitiesOperation::prevent_repacking_
private

Referenced by apply(), parse_tag(), and prevent_repacking().

std::string protocols::task_operations::RestrictIdentitiesOperation::unparsed_identities_
private

Referenced by parse_tag().


The documentation for this class was generated from the following files: