core::pose::xyzStripeHashPose Class Reference

#include <xyzStripeHashPose.hh>

Inheritance diagram for core::pose::xyzStripeHashPose:

Public Member Functions
	xyzStripeHashPose (platform::Real radius=0.0)
	xyzStripeHashPose (core::pose::Pose const &p, PoseCoordPickMode m=PoseCoordPickMode_BB, platform::Real radius=0.0)
	xyzStripeHashPose (core::pose::Pose const &p, utility::vector1< int > const &resmap, PoseCoordPickMode m=PoseCoordPickMode_BB, platform::Real radius=0.0)
	xyzStripeHashPose (core::pose::Pose const &p, core::id::AtomID_Map< platform::Real > const &amap, platform::Real radius=0.0)
void	add_pose (core::pose::Pose const &p, core::id::AtomID_Map< platform::Real > const &amap)
void	add_pose (core::pose::Pose const &p, PoseCoordPickMode m=PoseCoordPickMode_BB)
void	init_posehash ()

Static Public Member Functions
static void	extract_pose_balls (core::pose::Pose const &p, utility::vector1< numeric::geometry::hashing::Ball > &balls, PoseCoordPickMode m=PoseCoordPickMode_BB)
static void	extract_pose_balls (core::pose::Pose const &p, utility::vector1< numeric::geometry::hashing::Ball > &balls, core::id::AtomID_Map< platform::Real > const &amap)

Private Attributes
utility::vector1< numeric::geometry::hashing::Ball >	balls_
bool	initialized_

Constructor & Destructor Documentation

xyzStripeHashPose() [1/4]

core::pose::xyzStripeHashPose::xyzStripeHashPose

(

platform::Real

radius = 0.0

)

xyzStripeHashPose() [2/4]

core::pose::xyzStripeHashPose::xyzStripeHashPose	(	core::pose::Pose const &	p,
		PoseCoordPickMode	m = PoseCoordPickMode_BB,
		platform::Real	radius = 0.0
	)

References add_pose(), and init_posehash().

xyzStripeHashPose() [3/4]

core::pose::xyzStripeHashPose::xyzStripeHashPose	(	core::pose::Pose const &	p,
		utility::vector1< int > const &	resmap,
		PoseCoordPickMode	m = PoseCoordPickMode_BB,
		platform::Real	radius = 0.0
	)

References core::conformation::Residue::atom_type(), balls_, init_posehash(), core::chemical::AtomType::lj_radius(), core::pose::make_atom_map(), core::id::AtomID_Map< T >::n_atom(), core::pose::Pose::residue(), core::pose::Pose::size(), and core::pose::Pose::xyz().

xyzStripeHashPose() [4/4]

core::pose::xyzStripeHashPose::xyzStripeHashPose	(	core::pose::Pose const &	p,
		core::id::AtomID_Map< platform::Real > const &	amap,
		platform::Real	radius = 0.0
	)

References add_pose(), and init_posehash().

Member Function Documentation

add_pose() [1/2]

void core::pose::xyzStripeHashPose::add_pose	(	core::pose::Pose const &	p,
		core::id::AtomID_Map< platform::Real > const &	amap
	)

References balls_, extract_pose_balls(), and initialized_.

Referenced by xyzStripeHashPose().

add_pose() [2/2]

void core::pose::xyzStripeHashPose::add_pose	(	core::pose::Pose const &	p,
		PoseCoordPickMode	m = PoseCoordPickMode_BB
	)

References balls_, extract_pose_balls(), and initialized_.

extract_pose_balls() [1/2]

void core::pose::xyzStripeHashPose::extract_pose_balls ( core::pose::Pose const &  p, utility::vector1< numeric::geometry::hashing::Ball > &  balls, core::id::AtomID_Map< platform::Real > const &  amap  )

static

References core::conformation::Residue::atom_type(), core::chemical::AtomType::lj_radius(), core::id::AtomID_Map< T >::n_atom(), core::pose::Pose::residue(), core::pose::Pose::size(), and core::pose::Pose::xyz().

extract_pose_balls() [2/2]

void core::pose::xyzStripeHashPose::extract_pose_balls ( core::pose::Pose const &  p, utility::vector1< numeric::geometry::hashing::Ball > &  balls, PoseCoordPickMode  m = PoseCoordPickMode_BB  )

static

References core::pose::make_atom_map().

Referenced by add_pose(), protocols::scoring::methods::TargetClashEnergy::finalize_total_energy(), protocols::motif_grafting::movers::MotifGraftMover::get_matching_fragments(), protocols::scoring::methods::TargetClashEnergy::initiate_voxel(), and protocols::motif_grafting::movers::MotifGraftMover::test_epigraft_and_contextStructure_clashes().

init_posehash()

void core::pose::xyzStripeHashPose::init_posehash

(

)

References balls_, core::init::init(), and initialized_.

Referenced by xyzStripeHashPose().

Member Data Documentation

balls_

utility::vector1<numeric::geometry::hashing::Ball> core::pose::xyzStripeHashPose::balls_

private

Referenced by add_pose(), init_posehash(), and xyzStripeHashPose().

initialized_

bool core::pose::xyzStripeHashPose::initialized_

private

Referenced by add_pose(), and init_posehash().

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The documentation for this class was generated from the following files:

• src/core/pose/xyzStripeHashPose.hh
• src/core/pose/xyzStripeHashPose.cc