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DesignProteinBackboneAroundDNA.cc File Reference

performs a round flexible backbone sampling/design. (Interim(?) encapsulation of some loose code in a mover class.) More...

#include <protocols/dna/DesignProteinBackboneAroundDNA.hh>
#include <protocols/dna/DesignProteinBackboneAroundDNACreator.hh>
#include <core/chemical/ResidueType.hh>
#include <core/kinematics/FoldTree.hh>
#include <basic/options/option.hh>
#include <core/pack/pack_rotamers.hh>
#include <core/pack/task/PackerTask.hh>
#include <core/pack/task/TaskFactory.hh>
#include <core/pack/task/operation/TaskOperations.hh>
#include <core/pack/task/operation/ResFilters.hh>
#include <core/pack/task/operation/ResLvlTaskOperations.hh>
#include <core/pack/task/operation/OperateOnCertainResidues.hh>
#include <core/pose/Pose.hh>
#include <core/pose/PDBInfo.hh>
#include <core/scoring/ScoreFunction.hh>
#include <core/scoring/methods/EnergyMethodOptions.hh>
#include <basic/Tracer.hh>
#include <protocols/dna/DnaDesignDef.hh>
#include <protocols/dna/RestrictDesignToProteinDNAInterface.hh>
#include <protocols/loops/Loop.hh>
#include <protocols/loops/Loops.hh>
#include <protocols/loops/loop_mover/refine/LoopMover_CCD.hh>
#include <protocols/loops/make_loops.hh>
#include <protocols/loops/loops_main.hh>
#include <protocols/backrub/BackrubMover.hh>
#include <protocols/moves/MonteCarlo.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <protocols/task_operations/RestrictToNeighborhoodOperation.hh>
#include <utility/tag/Tag.hh>
#include <utility/vector1.hh>
#include <sstream>
#include <set>
#include <iostream>
#include <basic/options/keys/backrub.OptionKeys.gen.hh>
#include <basic/options/keys/dna.OptionKeys.gen.hh>
#include <basic/options/keys/MonteCarlo.OptionKeys.gen.hh>
#include <basic/options/keys/loops.OptionKeys.gen.hh>
#include <basic/options/keys/packing.OptionKeys.gen.hh>
#include <basic/options/keys/run.OptionKeys.gen.hh>
#include <utility/vector0.hh>
#include <utility/keys/Key3Vector.hh>
#include <iterator>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>

Namespaces

 protocols
 The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
 
 protocols::dna
 

Functions

static basic::Tracer protocols::dna::TR ("protocols.dna.DesignProteinBackboneAroundDNA", t_info)
 

Detailed Description

performs a round flexible backbone sampling/design. (Interim(?) encapsulation of some loose code in a mover class.)

Author
ashworth