#include <LazySilentFileJobInputter.hh>
Public Member Functions | |
| LazySilentFileJobInputter () | |
| ~LazySilentFileJobInputter () override | |
| void | pose_from_job (core::pose::Pose &pose, JobOP job) override |
| this function is responsible for returning the starting pose to use for the input job. The Job object (within its InnerJob) contains a PoseCOP. This function needs to either create a new Pose from the InnerJob Pose or, on first demand of a pose from that InnerJob, instantiate the pose, hand off a COP to the InnerJob, and fill the reference. More... | |
| virtual core::io::silent::SilentStruct const & | struct_from_job (JobOP job) |
| void | fill_jobs (JobsContainer &jobs) override |
| this function determines what jobs exist. This function neither knows nor cares what jobs are already complete on disk/memory - it just figures out what ones should exist given the input. NOTE: your JobInputter should order Job objects in the Jobs vector to have as few "transitions" between inputs as possible (group all Jobs of the same input next to each other). This improves efficiency of the "FAIL_BAD_INPUT" functionality. Note I (Brave Sir Steven) said "should", not "must". More... | |
| JobInputterInputSource::Enum | input_source () const override |
| return the type of input source that the JobInputter is currently using More... | |
| core::io::silent::SilentFileData const & | silent_file_data () const |
 Public Member Functions inherited from protocols::jd2::JobInputter | |
| ~JobInputter () override | |
| JobInputterCOP | get_self_ptr () const |
| Get self const owning pointers. More... | |
| JobInputterOP | get_self_ptr () |
| Get self owning pointers. More... | |
| JobInputterCAP | get_self_weak_ptr () const |
| Get self const weak pointers. More... | |
| JobInputterAP | get_self_weak_ptr () |
| Get self weak pointers. More... | |
| virtual void | update_jobs_list (JobsContainerOP jobs) |
| This function is only called by certain JobInputters to update the jobs list after it has already been created. More... | |
| virtual bool | updates_jobs_list () const |
| Does this type of JobInputter update the jobs list? More... | |
Private Attributes | |
| core::io::silent::SilentFileData | sfd_ |
Additional Inherited Members | |
| Static Public Member Functions inherited from protocols::jd2::JobInputter | |
| static std::string | job_inputter_input_source_to_string (JobInputterInputSource::Enum source) |
| call this with input_source() to get the input source of a particular job inputter More... | |
| Protected Member Functions inherited from protocols::jd2::JobInputter | |
| void | load_pose_into_job (core::pose::Pose const &pose, JobOP job) |
| this function modifies the InnerJob's pose. Access to that pose is via friendship. More... | |
| void | load_pose_into_job (core::pose::PoseCOP pose, JobOP job) |
| this function modifies the InnerJob's pose. Access to that pose is via friendship. More... | |
| virtual core::Size | get_nstruct () const |
| this code is here to restrict the use of inner_job_nonconst (this class is a friend class and can do it) More... | |
Constructor & Destructor Documentation
◆ LazySilentFileJobInputter()
| protocols::jd2::LazySilentFileJobInputter::LazySilentFileJobInputter | ( | ) |
References protocols::jd2::tr().
◆ ~LazySilentFileJobInputter()
|
overridedefault |
Member Function Documentation
◆ fill_jobs()
|
overridevirtual |
this function determines what jobs exist. This function neither knows nor cares what jobs are already complete on disk/memory - it just figures out what ones should exist given the input. NOTE: your JobInputter should order Job objects in the Jobs vector to have as few "transitions" between inputs as possible (group all Jobs of the same input next to each other). This improves efficiency of the "FAIL_BAD_INPUT" functionality. Note I (Brave Sir Steven) said "should", not "must".
Implements protocols::jd2::JobInputter.
References core::sequence::end, protocols::jd2::JobsContainer::push_back(), and protocols::jd2::tr().
◆ input_source()
|
overridevirtual |
return the type of input source that the JobInputter is currently using
Implements protocols::jd2::JobInputter.
References protocols::jd2::JobInputterInputSource::SILENT_FILE.
◆ pose_from_job()
|
overridevirtual |
this function is responsible for returning the starting pose to use for the input job. The Job object (within its InnerJob) contains a PoseCOP. This function needs to either create a new Pose from the InnerJob Pose or, on first demand of a pose from that InnerJob, instantiate the pose, hand off a COP to the InnerJob, and fill the reference.
Implements protocols::jd2::JobInputter.
References core::pose::Pose::clear(), core::pose::tag_into_pose(), and protocols::jd2::tr().
◆ silent_file_data()
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inline |
References sfd_.
◆ struct_from_job()
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virtual |
Member Data Documentation
◆ sfd_
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private |
Referenced by silent_file_data().
The documentation for this class was generated from the following files:
- src/protocols/jd2/LazySilentFileJobInputter.hh
- src/protocols/jd2/LazySilentFileJobInputter.cc
