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Classes | Namespaces
ImplicitLipidInfo.hh File Reference

An Implicit Lipid Membrane Model. More...

#include <core/conformation/membrane/ImplicitLipidInfo.fwd.hh>
#include <core/conformation/membrane/MembraneInfo.hh>
#include <core/conformation/membrane/SpanningTopology.fwd.hh>
#include <core/conformation/membrane/AqueousPoreParameters.fwd.hh>
#include <core/types.hh>
#include <numeric/MathMatrix.hh>
#include <numeric/xyzVector.hh>
#include <numeric/cubic_polynomial.hh>
#include <utility/pointer/owning_ptr.hh>
#include <utility/VirtualBase.hh>

Classes

class  core::conformation::membrane::ImplicitLipidInfo
 Definition of an implicit membrane with parameters for different lipid compositions. More...
 

Namespaces

 core
 A class for reading in the atom type properties.
 
 core::conformation
 
 core::conformation::membrane
 

Detailed Description

An Implicit Lipid Membrane Model.

Version
menv-franklin2018 [Alford] et al. (2019) "A thermodynamically-inspired, biologically-driven energy function for membrane protein modeling and design"

This class defines physical and chemical properties of the membrane environment. It is mainly used by the membrane energy function.

  1. Parameters of the hydration function (e.g. thickness, rate, of transition, pore size)
  2. Lipid composition details
  3. Hydration function smoothing parameters
  4. Structure-based lipid accessibiity information
Author
Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)
Version
menv-franklin2018

This class defines physical and chemical properties of the membrane environment. It is mainly used by the membrane energy function.

  1. Parameters of the hydration function (e.g. thickness, rate, of transition, pore size)
  2. Lipid composition details
  3. Hydration function smoothing parameters
  4. Structure-based lipid accessibiity information
Author
Rebecca Alford (rfalf.nosp@m.ord1.nosp@m.2@gma.nosp@m.il.c.nosp@m.om)