Rosetta: protocols::task_operations::LimitAromaChi2Operation Class Reference

#include <LimitAromaChi2Operation.hh>

Inheritance diagram for protocols::task_operations::LimitAromaChi2Operation:

Inheritance graph

Public Types
typedef core::Real	Real

typedef core::pose::Pose	Pose

typedef core::pack::task::PackerTask	PackerTask

typedef core::pack::task::operation::TaskOperation	TaskOperation

typedef core::pack::task::operation::TaskOperationOP	TaskOperationOP

typedef TaskOperation	parent

typedef utility::tag::TagCOP	TagCOP

Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP	TagCOP

typedef basic::datacache::DataMap	DataMap

typedef pose::Pose	Pose

Public Member Functions
	LimitAromaChi2Operation ()
	default constructor More...

	~LimitAromaChi2Operation () override
	destructor More...

TaskOperationOP	clone () const override
	make clone More...

Real	chi2max () const
	max chi2 for picking rotamers of YFH More...

Real	chi2min () const
	min chi2 for picking rotamers of YFH More...

bool	include_trp () const
	include TRP ? More...

void	chi2max (Real const r)
	max chi2 for picking rotamers of YFH More...

void	chi2min (Real const r)
	min chi2 for picking rotamers of YFH More...

void	include_trp (bool const b)
	include TRP ? More...

void	apply (Pose const &pose, PackerTask &task) const override
	apply More...

void	parse_tag (TagCOP tag, DataMap &) override
	Used to parse an xml-like tag to load parameters and properties. More...

Public Member Functions inherited from core::pack::task::operation::TaskOperation
	~TaskOperation () override

virtual bool	task_operation_provides_citation_info () const
	Does this task operation provide information about how to cite it? More...

virtual utility::vector1 < basic::citation_manager::CitationCollectionCOP >	provide_citation_info () const
	Provide the citation. More...

virtual bool	task_operation_is_unpublished () const
	Does this task_operation indicate that it is unpublished (and, by extension, that the author should be included in publications resulting from it)? More...

virtual utility::vector1 < basic::citation_manager::UnpublishedModuleInfoCOP >	provide_authorship_info_for_unpublished () const
	Provide a list of authors and their e-mail addresses, as strings. More...

Static Public Member Functions
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

static std::string	keyname ()

Private Attributes
Real	chi2max_
	max chi2 for picking rotamers of YFH More...

Real	chi2min_
	min chi2 for picking rotamers of YFH More...

bool	include_trp_
	include TRP ? ( default false ) More...

Member Typedef Documentation

typedef core::pack::task::PackerTask protocols::task_operations::LimitAromaChi2Operation::PackerTask

typedef TaskOperation protocols::task_operations::LimitAromaChi2Operation::parent

typedef core::pose::Pose protocols::task_operations::LimitAromaChi2Operation::Pose

typedef core::Real protocols::task_operations::LimitAromaChi2Operation::Real

typedef utility::tag::TagCOP protocols::task_operations::LimitAromaChi2Operation::TagCOP

typedef core::pack::task::operation::TaskOperation protocols::task_operations::LimitAromaChi2Operation::TaskOperation

typedef core::pack::task::operation::TaskOperationOP protocols::task_operations::LimitAromaChi2Operation::TaskOperationOP

Constructor & Destructor Documentation

protocols::task_operations::LimitAromaChi2Operation::LimitAromaChi2Operation ( )

default constructor

defauot constructor

protocols::task_operations::LimitAromaChi2Operation::~LimitAromaChi2Operation ( )

overridedefault

destructor

Member Function Documentation

void protocols::task_operations::LimitAromaChi2Operation::apply	(	Pose const &	pose,
		PackerTask &	task
	)		const

overridevirtual

apply

Implements core::pack::task::operation::TaskOperation.

References core::pack::task::PackerTask::append_rotamerset_operation(), chi2max_, chi2min_, and include_trp_.

Real protocols::task_operations::LimitAromaChi2Operation::chi2max ( ) const

inline

max chi2 for picking rotamers of YFH

References chi2max_.

Referenced by parse_tag().

void protocols::task_operations::LimitAromaChi2Operation::chi2max ( Real const r )

inline

max chi2 for picking rotamers of YFH

References chi2max_.

Real protocols::task_operations::LimitAromaChi2Operation::chi2min ( ) const

inline

min chi2 for picking rotamers of YFH

References chi2min_.

Referenced by parse_tag().

void protocols::task_operations::LimitAromaChi2Operation::chi2min ( Real const r )

inline

min chi2 for picking rotamers of YFH

References chi2min_.

core::pack::task::operation::TaskOperationOP protocols::task_operations::LimitAromaChi2Operation::clone ( ) const

overridevirtual

make clone

clone

Implements core::pack::task::operation::TaskOperation.

bool protocols::task_operations::LimitAromaChi2Operation::include_trp ( ) const

inline

include TRP ?

References include_trp_.

Referenced by parse_tag().

void protocols::task_operations::LimitAromaChi2Operation::include_trp ( bool const b )

inline

include TRP ?

References protocols::match::upstream::b, and include_trp_.

static std::string protocols::task_operations::LimitAromaChi2Operation::keyname ( )

inlinestatic

Referenced by protocols::task_operations::LimitAromaChi2OperationCreator::keyname(), and provide_xml_schema().

void protocols::task_operations::LimitAromaChi2Operation::parse_tag	(	TagCOP	tag,
		DataMap &
	)

overridevirtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

References chi2max(), chi2min(), and include_trp().

void protocols::task_operations::LimitAromaChi2Operation::provide_xml_schema ( utility::tag::XMLSchemaDefinition & xsd )

static

References keyname(), and core::pack::task::operation::task_op_schema_w_attributes().

Referenced by protocols::task_operations::LimitAromaChi2OperationCreator::provide_xml_schema().

Member Data Documentation

Real protocols::task_operations::LimitAromaChi2Operation::chi2max_

private

max chi2 for picking rotamers of YFH

Referenced by apply(), and chi2max().

Real protocols::task_operations::LimitAromaChi2Operation::chi2min_

private

min chi2 for picking rotamers of YFH

Referenced by apply(), and chi2min().

bool protocols::task_operations::LimitAromaChi2Operation::include_trp_

private

include TRP ? ( default false )

Referenced by apply(), and include_trp().

The documentation for this class was generated from the following files:

src/protocols/task_operations/LimitAromaChi2Operation.hh
src/protocols/task_operations/LimitAromaChi2Operation.cc