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Public Member Functions | Static Public Member Functions | Private Attributes | List of all members
core::import_pose::options::RNA_BasicOptions Class Reference

#include <RNA_BasicOptions.hh>

Inheritance diagram for core::import_pose::options::RNA_BasicOptions:
Inheritance graph
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Public Member Functions

 RNA_BasicOptions ()
 
RNA_BasicOptionsOP clone () const
 clone the options More...
 
void initialize_from_command_line ()
 
void initialize_from_options (utility::options::OptionCollection const &opts)
 
void initialize_from_tag (utility::tag::TagCOP const &tag)
 
virtual void parse_my_tag (utility::tag::TagCOP)
 Initialize from the recursive "tag" structure. More...
 
virtual std::string type () const
 The class name (its type) for a particular ResourceOptions instance. This function allows for better error message delivery. More...
 
void set_dump_pdb (bool const setting)
 
bool dump_pdb () const
 
void set_move_first_rigid_body (bool const &setting)
 
bool move_first_rigid_body () const
 
void set_dock_into_density (bool const &setting)
 
bool dock_into_density () const
 
void set_model_with_density (bool const &setting)
 
bool model_with_density () const
 
void set_verbose (bool const &setting)
 
bool verbose () const
 

Static Public Member Functions

static void list_attributes (utility::tag::AttributeList &attlist)
 
static void list_options_read (utility::options::OptionKeyList &opts)
 

Private Attributes

bool dump_pdb_
 
bool move_first_rigid_body_
 
bool dock_into_density_
 
bool model_with_density_
 
bool verbose_
 

Constructor & Destructor Documentation

core::import_pose::options::RNA_BasicOptions::RNA_BasicOptions ( )

Member Function Documentation

RNA_BasicOptionsOP core::import_pose::options::RNA_BasicOptions::clone ( ) const

clone the options

bool core::import_pose::options::RNA_BasicOptions::dock_into_density ( ) const
inline

References dock_into_density_.

bool core::import_pose::options::RNA_BasicOptions::dump_pdb ( ) const
inline

References dump_pdb_.

void core::import_pose::options::RNA_BasicOptions::initialize_from_command_line ( )
void core::import_pose::options::RNA_BasicOptions::initialize_from_options ( utility::options::OptionCollection const &  opts)
void core::import_pose::options::RNA_BasicOptions::initialize_from_tag ( utility::tag::TagCOP const &  tag)
void core::import_pose::options::RNA_BasicOptions::list_attributes ( utility::tag::AttributeList &  attlist)
static
void core::import_pose::options::RNA_BasicOptions::list_options_read ( utility::options::OptionKeyList &  opts)
static
bool core::import_pose::options::RNA_BasicOptions::model_with_density ( ) const
inline

References model_with_density_.

bool core::import_pose::options::RNA_BasicOptions::move_first_rigid_body ( ) const
inline
virtual void core::import_pose::options::RNA_BasicOptions::parse_my_tag ( utility::tag::TagCOP  )
inlinevirtual
void core::import_pose::options::RNA_BasicOptions::set_dock_into_density ( bool const &  setting)
inline
void core::import_pose::options::RNA_BasicOptions::set_dump_pdb ( bool const  setting)
inline
void core::import_pose::options::RNA_BasicOptions::set_model_with_density ( bool const &  setting)
inline
void core::import_pose::options::RNA_BasicOptions::set_move_first_rigid_body ( bool const &  setting)
inline
void core::import_pose::options::RNA_BasicOptions::set_verbose ( bool const &  setting)
inline

References verbose_.

virtual std::string core::import_pose::options::RNA_BasicOptions::type ( ) const
inlinevirtual

The class name (its type) for a particular ResourceOptions instance. This function allows for better error message delivery.

Reimplemented in core::import_pose::options::RNA_FragmentMonteCarloOptions, core::import_pose::options::RNA_MinimizerOptions, and core::import_pose::options::RNA_DeNovoProtocolOptions.

bool core::import_pose::options::RNA_BasicOptions::verbose ( ) const
inline

References verbose_.

Member Data Documentation

bool core::import_pose::options::RNA_BasicOptions::dock_into_density_
private
bool core::import_pose::options::RNA_BasicOptions::dump_pdb_
private

Referenced by dump_pdb(), and set_dump_pdb().

bool core::import_pose::options::RNA_BasicOptions::model_with_density_
private
bool core::import_pose::options::RNA_BasicOptions::move_first_rigid_body_
private
bool core::import_pose::options::RNA_BasicOptions::verbose_
private

Referenced by set_verbose(), and verbose().


The documentation for this class was generated from the following files: