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core::pack::task::operation::RotamerExplosion Class Reference

rotamer explosion for a residue More...

#include <TaskOperations.hh>

Inheritance diagram for core::pack::task::operation::RotamerExplosion:
Inheritance graph
[legend]

Public Types

typedef TaskOperation parent
 
- Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP TagCOP
 
typedef basic::datacache::DataMap DataMap
 
typedef pose::Pose Pose
 

Public Member Functions

 RotamerExplosion ()
 
 RotamerExplosion (core::Size const resid, ExtraRotSample const sample_level, core::Size const chi)
 
 ~RotamerExplosion () override
 
TaskOperationOP clone () const override
 Create another task operation of the type matching the most-derived version of the class. More...
 
void apply (pose::Pose const &, PackerTask &) const override
 Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...
 
void parse_tag (TagCOP, DataMap &) override
 Used to parse an xml-like tag to load parameters and properties. More...
 
void resid (core::Size const r)
 
void chi (core::Size const c)
 
void sample_level (ExtraRotSample const s)
 
- Public Member Functions inherited from core::pack::task::operation::TaskOperation
 ~TaskOperation () override
 
virtual bool task_operation_provides_citation_info () const
 Does this task operation provide information about how to cite it? More...
 
virtual utility::vector1
< basic::citation_manager::CitationCollectionCOP > 
provide_citation_info () const
 Provide the citation. More...
 
virtual bool task_operation_is_unpublished () const
 Does this task_operation indicate that it is unpublished (and, by extension, that the author should be included in publications resulting from it)? More...
 
virtual utility::vector1
< basic::citation_manager::UnpublishedModuleInfoCOP > 
provide_authorship_info_for_unpublished () const
 Provide a list of authors and their e-mail addresses, as strings. More...
 

Static Public Member Functions

static std::string keyname ()
 
static void provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)
 

Private Attributes

core::Size resid_
 
core::Size chi_
 
ExtraRotSample sample_level_
 

Detailed Description

rotamer explosion for a residue

Member Typedef Documentation

Constructor & Destructor Documentation

core::pack::task::operation::RotamerExplosion::RotamerExplosion ( )
default
core::pack::task::operation::RotamerExplosion::RotamerExplosion ( core::Size const  resid,
ExtraRotSample const  sample_level,
core::Size const  chi 
)
core::pack::task::operation::RotamerExplosion::~RotamerExplosion ( )
overridedefault

Member Function Documentation

void core::pack::task::operation::RotamerExplosion::apply ( pose::Pose const &  ,
PackerTask  
) const
overridevirtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::TaskOperation.

References chi_, core::pack::task::PackerTask::nonconst_residue_task(), core::pack::task::ResidueLevelTask::or_ex1_sample_level(), resid_, and sample_level_.

void core::pack::task::operation::RotamerExplosion::chi ( core::Size const  c)

References core::pack::dunbrack::c, and chi_.

Referenced by parse_tag().

TaskOperationOP core::pack::task::operation::RotamerExplosion::clone ( ) const
overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

std::string core::pack::task::operation::RotamerExplosion::keyname ( )
static
void core::pack::task::operation::RotamerExplosion::parse_tag ( TagCOP  tag,
DataMap  
)
overridevirtual

Used to parse an xml-like tag to load parameters and properties.

Reimplemented from core::pack::task::operation::TaskOperation.

References chi(), core::pack::task::EX_THREE_THIRD_STEP_STDDEVS, resid(), and sample_level().

void core::pack::task::operation::RotamerExplosion::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd)
static
void core::pack::task::operation::RotamerExplosion::resid ( core::Size const  r)

References resid_.

Referenced by parse_tag().

void core::pack::task::operation::RotamerExplosion::sample_level ( ExtraRotSample const  s)

References sample_level_.

Referenced by parse_tag().

Member Data Documentation

core::Size core::pack::task::operation::RotamerExplosion::chi_
private

Referenced by apply(), and chi().

core::Size core::pack::task::operation::RotamerExplosion::resid_
private

Referenced by apply(), and resid().

ExtraRotSample core::pack::task::operation::RotamerExplosion::sample_level_
private

Referenced by apply(), and sample_level().


The documentation for this class was generated from the following files: