Rosetta  2021.07
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Classes | Typedefs | Functions
protocols::indexed_structure_store::search Namespace Reference

Classes

class  PairQueryExecutor
 
struct  PairQuerySummaryStatistics
 
class  SingleQueryExecutor
 
struct  SingleQuerySummaryStatistics
 
class  StructureData
 
class  StructureDatabase
 
class  StructurePairQuery
 
struct  StructurePairQueryResult
 
class  StructureSingleQuery
 
struct  StructureSingleQueryResult
 

Typedefs

typedef
utility::pointer::shared_ptr
< StructureDatabase
StructureDatabaseOP
 
typedef
utility::pointer::shared_ptr
< StructureDatabase const > 
StructureDatabaseCOP
 
typedef int64_t Index
 
typedef float SearchReal
 

Functions

void to_json (nlohmann::json &j, const SingleQuerySummaryStatistics &s)
 
void from_json (const nlohmann::json &j, SingleQuerySummaryStatistics &s)
 
void to_json (nlohmann::json &j, const StructureSingleQueryResult &s)
 
void from_json (const nlohmann::json &j, StructureSingleQueryResult &s)
 
void to_json (nlohmann::json &j, const PairQuerySummaryStatistics &s)
 
void from_json (const nlohmann::json &j, PairQuerySummaryStatistics &s)
 
void to_json (nlohmann::json &j, const StructurePairQueryResult &s)
 
void from_json (const nlohmann::json &j, StructurePairQueryResult &s)
 
template<typename Module >
void bind_QueryDatabase (Module &m)
 

Typedef Documentation

Function Documentation

template<typename Module >
void protocols::indexed_structure_store::search::bind_QueryDatabase ( Module &  m)

References protocols::indexed_structure_store::search::StructurePairQuery::c_per_entry, protocols::indexed_structure_store::search::StructureSingleQuery::c_per_entry, protocols::indexed_structure_store::search::StructureData::chain_endpoints, protocols::indexed_structure_store::search::StructureData::coordinate_buffer, core::energy_methods::eval(), protocols::indexed_structure_store::search::PairQueryExecutor::execute(), protocols::indexed_structure_store::search::SingleQueryExecutor::execute(), protocols::indexed_structure_store::search::PairQueryExecutor::execute_structure(), protocols::indexed_structure_store::search::SingleQueryExecutor::execute_structure(), protocols::indexed_structure_store::search::PairQuerySummaryStatistics::fragments_considered, protocols::indexed_structure_store::search::SingleQuerySummaryStatistics::fragments_considered, protocols::indexed_structure_store::search::PairQuerySummaryStatistics::fragments_expanded, protocols::indexed_structure_store::search::StructureData::get_fragment_centers_of_mass_copy(), protocols::indexed_structure_store::search::StructureData::get_fragment_indicies_copy(), protocols::indexed_structure_store::search::StructureDatabase::get_structure_data(), core::init::init(), protocols::indexed_structure_store::search::StructureDatabase::initialize(), protocols::indexed_structure_store::search::StructureSingleQuery::n_entry, protocols::indexed_structure_store::search::StructurePairQuery::n_entry_a, protocols::indexed_structure_store::search::StructurePairQuery::n_entry_b, protocols::indexed_structure_store::search::PairQuerySummaryStatistics::pairs_aligned, protocols::indexed_structure_store::search::PairQuerySummaryStatistics::pairs_considered, protocols::indexed_structure_store::search::StructureSingleQuery::q_buffer, protocols::indexed_structure_store::search::StructurePairQuery::q_buffer_a, protocols::indexed_structure_store::search::StructurePairQuery::q_buffer_b, protocols::indexed_structure_store::search::PairQueryExecutor::query_results, protocols::indexed_structure_store::search::SingleQueryExecutor::query_results, protocols::indexed_structure_store::search::PairQuerySummaryStatistics::result_count, protocols::indexed_structure_store::search::SingleQuerySummaryStatistics::result_count, protocols::indexed_structure_store::search::StructurePairQuery::rmsd_tolerance, protocols::indexed_structure_store::search::StructureSingleQuery::rmsd_tolerance, protocols::indexed_structure_store::search::StructureData::structure_offset, protocols::indexed_structure_store::search::PairQuerySummaryStatistics::structures_considered, and protocols::indexed_structure_store::search::SingleQuerySummaryStatistics::structures_considered.

void protocols::indexed_structure_store::search::from_json ( const nlohmann::json &  j,
SingleQuerySummaryStatistics &  s 
)
inline
void protocols::indexed_structure_store::search::from_json ( const nlohmann::json &  j,
StructureSingleQueryResult &  s 
)
inline
void protocols::indexed_structure_store::search::from_json ( const nlohmann::json &  j,
PairQuerySummaryStatistics &  s 
)
inline
void protocols::indexed_structure_store::search::from_json ( const nlohmann::json &  j,
StructurePairQueryResult &  s 
)
inline
void protocols::indexed_structure_store::search::to_json ( nlohmann::json &  j,
const SingleQuerySummaryStatistics &  s 
)
inline
void protocols::indexed_structure_store::search::to_json ( nlohmann::json &  j,
const StructureSingleQueryResult &  s 
)
inline
void protocols::indexed_structure_store::search::to_json ( nlohmann::json &  j,
const PairQuerySummaryStatistics &  s 
)
inline
void protocols::indexed_structure_store::search::to_json ( nlohmann::json &  j,
const StructurePairQueryResult &  s 
)
inline