Rosetta
protocols::hybridization::CartesianHybridize Member List

This is the complete list of members for protocols::hybridization::CartesianHybridize, including all inherited members.

align_templates_to_pose_protocols::hybridization::CartesianHybridizeprivate
apply(core::pose::Pose &pose) overrideprotocols::hybridization::CartesianHybridizevirtual
apply_frag(core::pose::Pose &pose, core::pose::Pose &templ, protocols::loops::Loop &frag, bool superpose=true)protocols::hybridization::CartesianHybridizeprotected
apply_frame(core::pose::Pose &pose, core::fragment::Frame &frame)protocols::hybridization::CartesianHybridizeprotected
CartesianHybridize()protocols::hybridization::CartesianHybridize
CartesianHybridize(utility::vector1< core::pose::PoseOP > const &templates_in, utility::vector1< core::Real > const &template_wts_in, utility::vector1< protocols::loops::Loops > const &template_chunks_in, utility::vector1< protocols::loops::Loops > const &template_contigs_in, core::fragment::FragSetOP fragments9_in)protocols::hybridization::CartesianHybridize
cartfrag_overlap_protocols::hybridization::CartesianHybridizeprivate
cenrot_protocols::hybridization::CartesianHybridizeprivate
cenrot_repack_scorefxn_protocols::hybridization::CartesianHybridizeprivate
clear_info()protocols::moves::Moverinlinevirtual
clone() const overrideprotocols::hybridization::CartesianHybridizevirtual
create()protocols::moves::Movervirtual
current_job_protocols::moves::Moverprivate
current_tag_protocols::moves::Moverprivate
fragments9_protocols::hybridization::CartesianHybridizeprivate
fragprob_protocols::hybridization::CartesianHybridizeprivate
fresh_instance() const overrideprotocols::hybridization::CartesianHybridizevirtual
get_additional_output()protocols::moves::Movervirtual
get_current_job() constprotocols::moves::Mover
get_current_tag() constprotocols::moves::Moverinline
get_input_pose() constprotocols::moves::Mover
get_last_move_status() constprotocols::moves::Mover
get_name() const overrideprotocols::hybridization::CartesianHybridizeinlinevirtual
get_native_pose() constprotocols::moves::Mover
get_self_ptr() constprotocols::moves::Moverinline
get_self_ptr()protocols::moves::Moverinline
get_self_weak_ptr() constprotocols::moves::Moverinline
get_self_weak_ptr()protocols::moves::Moverinline
get_type() constprotocols::moves::Moverinline
increase_cycles_protocols::hybridization::CartesianHybridizeprivate
info()protocols::moves::Moverinlinevirtual
info() constprotocols::moves::Moverinlinevirtual
info_protocols::moves::Moverprivate
init()protocols::hybridization::CartesianHybridize
input_pose_protocols::moves::Moverprivate
last_proposal_density_ratio()protocols::moves::Moverinlinevirtual
last_status_protocols::moves::Moverprivate
library_protocols::hybridization::CartesianHybridizeprivate
linmin_only_protocols::hybridization::CartesianHybridizeprivate
lowres_scorefxn_protocols::hybridization::CartesianHybridizeprivate
max_contig_insertion_protocols::hybridization::CartesianHybridizeprivate
min_scorefxn_protocols::hybridization::CartesianHybridizeprivate
Mover()protocols::moves::Mover
Mover(std::string const &type_name)protocols::moves::Mover
name()protocols::moves::Moverinlinestatic
native_pose_protocols::moves::Moverprivate
ncycles_protocols::hybridization::CartesianHybridizeprivate
no_global_frame_protocols::hybridization::CartesianHybridizeprivate
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)protocols::moves::Movervirtual
Pose typedefprotocols::moves::Mover
PoseCOP typedefprotocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) constprotocols::moves::Movervirtual
randfragprob_protocols::hybridization::CartesianHybridizeprivate
register_options()protocols::moves::Moverinlinestatic
reinitialize_for_each_job() constprotocols::moves::Movervirtual
reinitialize_for_new_input() constprotocols::moves::Movervirtual
reset_status()protocols::moves::Mover
residue_sample_abinitio_protocols::hybridization::CartesianHybridizeprivate
residue_sample_template_protocols::hybridization::CartesianHybridizeprivate
seqfrags_only_protocols::hybridization::CartesianHybridizeprivate
set_cartfrag_overlap(core::Size cartfrag_overlap_in)protocols::hybridization::CartesianHybridizeinline
set_cenrot(bool cenrot_in)protocols::hybridization::CartesianHybridizeinline
set_current_job(protocols::jobdist::BasicJobCOP job)protocols::moves::Mover
set_current_tag(std::string const &new_tag)protocols::moves::Moverinlinevirtual
set_fragment_probs(core::Real prob, core::Real randprob)protocols::hybridization::CartesianHybridizeinline
set_increase_cycles(core::Real increase_cycles_in)protocols::hybridization::CartesianHybridizeinline
set_input_pose(PoseCOP pose)protocols::moves::Movervirtual
set_last_move_status(MoverStatus status)protocols::moves::Moverprotected
set_linmin_only(bool linmin_only_in)protocols::hybridization::CartesianHybridizeinline
set_max_insertion(int max_in)protocols::hybridization::CartesianHybridizeinline
set_min_scorefunction(core::scoring::ScoreFunctionOP scorefxn_in)protocols::hybridization::CartesianHybridize
set_native_pose(PoseCOP pose)protocols::moves::Movervirtual
set_no_global_frame(bool no_global_frame_in)protocols::hybridization::CartesianHybridizeinline
set_pack_scorefunction(core::scoring::ScoreFunctionOP scorefxn_in)protocols::hybridization::CartesianHybridize
set_per_residue_controls(utility::vector1< bool > const &residue_sample_template_in, utility::vector1< bool > const &residue_sample_abinitio_in)protocols::hybridization::CartesianHybridizeinline
set_scorefunction(core::scoring::ScoreFunctionOP scorefxn_in)protocols::hybridization::CartesianHybridize
set_seqfrags_only(bool seqfrags_only_in)protocols::hybridization::CartesianHybridizeinline
set_skip_long_min(bool skip_long_min_in)protocols::hybridization::CartesianHybridizeinline
set_temperature(core::Real temp_in)protocols::hybridization::CartesianHybridizeinline
set_type(std::string const &setting)protocols::moves::Moverinline
show(std::ostream &output=std::cout) constprotocols::moves::Movervirtual
skip_long_min_protocols::hybridization::CartesianHybridizeprivate
Strings typedefprotocols::moves::Mover
TagCOP typedefprotocols::moves::Mover
temperature_protocols::hybridization::CartesianHybridizeprivate
template_contigs_protocols::hybridization::CartesianHybridizeprivate
template_wts_protocols::hybridization::CartesianHybridizeprivate
templates_protocols::hybridization::CartesianHybridizeprivate
test_move(Pose &pose)protocols::moves::Moverinlinevirtual
type(const std::string &type_in)protocols::moves::Moverinline
type() constprotocols::moves::Moverinline
type_protocols::moves::Moverprivate